Candidatus Paracaedimonas acanthamoebae: IM40_03110
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Entry
IM40_03110 CDS
T03240
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IM40_03110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caq01007
]
IM40_03110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caq03016
]
IM40_03110
Enzymes [BR:
caq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
IM40_03110
Amino acid related enzymes [BR:
caq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IM40_03110
Transfer RNA biogenesis [BR:
caq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IM40_03110
Prokaryotic type
IM40_03110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
DUF3563
MapZ_EC1
DUF2536
Motif
Other DBs
NCBI-ProteinID:
AIL12743
LinkDB
All DBs
Position
complement(596401..598314)
Genome browser
AA seq
637 aa
AA seq
DB search
MVLITLPDGSSRSYEKEVTGHEIASSIGPRLAKEAIVVRVNEDLWDLNRPITADAKIEII
TRQQPEALEILRHDVAHLLAEAIKELYPEAQITIGPAIDNGFYYDIYRAESFTPADLEQL
EKRMAEIVDRDEAIERQVWQRDDAIAYFKSIGEHFKAEIISDLPQDEEVTLYKQGKFLDL
CRGPHLPSTARIGKAFKLMKLAGAYWRGDHRNPMLQRIYGTAWATEQQLKDYLHQLEEAE
KRDHRKLGREMDLFHLHEEAPGSVFWHPKGWEIYQTLQNYIRRLIKQSGYVEVNTPIMVD
RSLWEASGHWEKFRENMFTSHDDETKVMVVKPMNCPCHIQIFRQGIKSYRDLPLRMAEFG
SCHRNEPSGSLHGIMRVRAFVQDDAHIFCTPEQITSETKTFCQLLQRVYKDLGFEHVFVK
FSDRPEKRAGSDEVWDQAEQALREAALETGLEFILNPGEGAFYGPKLEFCLRDAIGREWQ
CGTFQVDFVLPQRLEASYVGEDGQKHHPVMLHRAILGSLERFIGVLIEHYAGKFPLWLAP
TQIAVATITDESHDYAHEISELLKSYDLRVETDLRNEKINYKIRELSLAKVPYIFVVGKR
EAQERTVAIRRLGGEMQEILALEDAIAKLRAEAQPPA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttttaataacactgcctgatggttcttctcgttcttatgaaaaagaagttacaggt
catgagattgcaagtagcattggccctcggcttgcaaaagaagcaattgtcgttagggta
aatgaagacctttgggatcttaaccgtcccatcacagccgatgcaaagattgaaatcatt
actcgtcaacaacccgaagcgcttgaaatccttcgccatgatgtcgcgcatctattagcg
gaagcaattaaagaactttatcctgaagcccaaattacaattggccctgccattgataat
ggtttttactacgatatctaccgcgcagaatctttcacgccagctgatcttgagcaactc
gagaaaagaatggctgagattgtagatcgggatgaggctattgaacgtcaagtttggcaa
cgagatgacgctattgcctattttaaatcaattggtgaacattttaaggctgagattatt
tcagatcttccacaagacgaagaagtgaccctttataaacaaggaaagttccttgatctt
tgccgaggtcctcaccttccttccaccgctcgtattggtaaagcttttaaattgatgaag
cttgctggcgcatactggcgtggagatcaccgtaaccccatgcttcaacgtatttatgga
acagcttgggccacagagcaacaattgaaagattacctccatcagttagaagaagctgaa
aagcgggaccatcgtaagcttggccgtgaaatggatctcttccatcttcatgaggaagca
cctggctctgtcttttggcatcccaaaggatgggaaatttatcaaactctccagaactat
attcgtcgccttattaagcaaagcggctatgttgaagtaaatacgcccattatggtggat
cgttccttatgggaggcctcaggtcactgggaaaaattccgtgaaaacatgtttacgtcg
catgatgatgaaacaaaagttatggtggtcaagcctatgaattgtccctgccatatccaa
atttttcgccaaggtatcaaaagttaccgcgatttacctttaagaatggctgaatttgga
tcatgtcatcgcaatgaaccctcaggatccctgcacggcattatgcgcgtacgggctttt
gtgcaagatgatgcgcatattttttgcacacctgaacaaattacatcagaaactaagacc
ttctgccaattattacaacgtgtttataaggatttagggtttgaacacgtatttgtaaaa
ttctcggatcgccccgaaaagcgggctggctcagatgaagtatgggaccaagcagaacaa
gctttacgagaagcagctttagaaacaggtcttgaatttatcctcaaccctggagaaggt
gctttttatggccctaaattagaattttgtcttcgagatgctattggtcgtgaatggcag
tgtggaacattccaagttgattttgtgcttcctcagcgtcttgaggcctcatatgtgggt
gaagatggtcaaaaacaccaccctgtcatgttacatcgagctattttagggtctttagag
cgctttattggcgtccttattgaacattatgccggaaaattccctctttggttggctccg
acacaaatagctgttgcaaccattacagatgagagccatgattatgcacatgaaatttct
gagttgcttaagtcttatgatttacgtgttgaaacggatctaagaaatgaaaaaattaat
tataaaattcgtgagttgagtcttgctaaagtcccttatatctttgttgttggtaaacga
gaagcacaagaacgcacagtggcgattcgtcgtttaggcggtgaaatgcaagaaatactt
gcacttgaagatgcaattgctaaactaagagcagaagcacaaccacctgcttaa
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