Candidatus Paracaedimonas acanthamoebae: IM40_03325
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Entry
IM40_03325 CDS
T03240
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq00260
Glycine, serine and threonine metabolism
caq00630
Glyoxylate and dicarboxylate metabolism
caq00670
One carbon pool by folate
caq00680
Methane metabolism
caq01100
Metabolic pathways
caq01110
Biosynthesis of secondary metabolites
caq01120
Microbial metabolism in diverse environments
caq01200
Carbon metabolism
caq01230
Biosynthesis of amino acids
caq01240
Biosynthesis of cofactors
caq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IM40_03325 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IM40_03325 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IM40_03325 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IM40_03325 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IM40_03325 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IM40_03325 (glyA)
Enzymes [BR:
caq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IM40_03325 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
mCpol
Motif
Other DBs
NCBI-ProteinID:
AIL12772
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Position
complement(635251..636513)
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AA seq
420 aa
AA seq
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MTEFKFLPLQDANVFNAIEQELHRQQNQLEMIASENFVSPAVLEAQGCIMTNKYAEGYPG
RRYYGGCTYVDQVETLAIERAKQLFNCTYVNVQPHSGSQANQAVFLALLQPGDTFLGMDL
NCGGHLTHGSPVNMSGKWFNAVSYPVHKETHLLDYELIEELALKHKPKLIIAGGSAYPRT
IDFARFRKIADQVGAYLMVDMAHFAGLVAGSVLPSPLPHAHVVTTTTHKTLRGPRGGMIL
SNDLDIGKKLNSAIFPGAQGGPLMHIIAAKAVAFKEALSPAFKQYAEQVVKNAKALVKTL
NEQGFNITTQGTDCHLLLVDLQQQKLTGQEACDALEHAGITCNKNGIPFDPLPPLKTSGI
RLGSPALTTRGMKEAEFEEIGFMIAELLKSLPHKDIETTQQKIRQKVAELCQSFPLYKDF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatttaaatttcttccccttcaagatgcaaatgtttttaatgccattgagcag
gaactccatcgccagcaaaatcaacttgaaatgatcgcttcagaaaattttgtttcacct
gccgttctagaagctcaaggatgcattatgacgaataaatatgctgaaggttaccctggg
cgccgttattatggaggatgtacctatgtcgatcaggttgagacgcttgccattgagcgc
gctaaacaactttttaattgtacctatgtgaatgttcaaccccattctggctctcaagca
aaccaagcagtgtttctagccctcttgcaaccaggcgatacttttctaggcatggatctt
aactgtggcgggcatttgacgcacggctcacccgttaatatgtcaggaaaatggtttaat
gcggttagttatcccgttcataaagagacccatcttttagattatgagctgatcgaagag
ctcgcccttaagcataaacctaagcttattattgcaggaggttccgcctaccctcgcact
attgattttgcccgttttagaaagatagccgatcaggttggagcttatttaatggttgat
atggctcattttgcaggtttagttgcgggtagcgtccttccctccccccttccccatgct
catgtggttacaactacgacgcataaaactttacgtggtccacggggtgggatgatcctt
tccaatgaccttgatattgggaaaaagcttaactcagccatctttcctggcgctcaaggc
ggccccttgatgcatattattgcggcaaaagctgttgcttttaaagaagccctctctcct
gctttcaaacaatatgctgagcaagttgttaaaaacgctaaagctctcgtaaagacactg
aacgagcaaggcttcaatatcaccacacaaggaacagattgccatctcttacttgtcgat
ttgcaacaacaaaaattaacaggtcaagaagcctgtgatgcacttgagcatgcaggaatt
acatgcaataagaatggtattccttttgatcctttgcctcccttaaagacctcaggcatc
cgtttaggctctcctgctcttaccacgcggggcatgaaggaagcagaatttgaagaaatt
ggttttatgattgctgaacttctcaaaagtcttccacataaggatattgagaccacgcaa
caaaagattcgccaaaaagttgctgaactttgtcaatcttttccactttataaggatttt
taa
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