Candidatus Paracaedimonas acanthamoebae: IM40_03445
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Entry
IM40_03445 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caq03016
]
IM40_03445
Enzymes [BR:
caq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IM40_03445
Transfer RNA biogenesis [BR:
caq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IM40_03445
Prokaryotic type
IM40_03445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIL12792
LinkDB
All DBs
Position
complement(657642..658529)
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AA seq
295 aa
AA seq
DB search
MSVHGWIIIDKPLNMTSTDVVRTIKRKFPKTKVGHAGTLDPLATGILPIALGEATKTIPY
LSEQKKTYRFEVTWGEQTTTDDAEGDTMLTSCYRPSEEEIIAILPQFTGQISQAPPRFSA
IKIGGKRAYNLARSGEDFSLPPRPAQIYSLRLLEVKSSDIAQFEVECRKGTYVRSLARDM
AKSLGTYGFASMIDRTAVGSFYKDTALSYETLAICDEKILKRDHVQNLIAGLDDIPAVMI
NEQEVEKVRCGQELHTSLSLSGELCLLCLHTAENPIAIAHIKGVRILPKRVFVLN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccacggatggattattattgataaaccgcttaacatgacatcaaccgatgtt
gtgcgcacaattaaacgaaaattccccaaaacaaaagtggggcatgctggaacgttagat
cctttagcaacaggcattctgcctattgctttaggagaagcaacaaaaacaatcccttat
ctctcagagcaaaagaaaacataccgttttgaggtgacttggggtgagcaaacaaccaca
gatgatgcggaaggtgataccatgctgacctcatgttatcgcccctctgaagaagaaata
atcgcgatcttgccgcaatttaccggtcaaattagccaagctccgccgcgattttctgcc
atcaaaatcggagggaaaagggcttataatttagcccgcagtggtgaagatttttcactt
cctcctcgcccagctcaaatttactctttgaggctgcttgaggttaaatcttctgatatt
gcgcaatttgaagtggaatgccgaaaaggaacctatgtgcgaagccttgcacgcgatatg
gcaaaatccctaggaacatatgggtttgcgagcatgattgatcgaacggctgtcggctct
ttttataaagatacagctttatcgtatgaaacgcttgcaatttgtgatgaaaagattcta
aaaagagaccatgtgcaaaatctcattgcagggctggacgacatcccggctgtaatgatt
aacgaacaggaagttgagaaagttcgttgtggtcaagaactccacacctctctttcactt
tctggcgagctttgtcttctttgccttcataccgcagagaaccccattgcgattgcacat
ataaagggcgtaaggattctgcccaaacgcgtatttgtattaaattaa
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