Candidatus Paracaedimonas acanthamoebae: IM40_03490
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Entry
IM40_03490 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K02281
pilus assembly protein CpaD
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
caq02044
]
IM40_03490
02035 Bacterial motility proteins [BR:
caq02035
]
IM40_03490
Secretion system [BR:
caq02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
IM40_03490
Bacterial motility proteins [BR:
caq02035
]
Pilus system
Pilus assembly proteins
IM40_03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pilus_CpaD
Cnn_1N
IL31
Motif
Other DBs
NCBI-ProteinID:
AIL12797
LinkDB
All DBs
Position
667289..667960
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AA seq
223 aa
AA seq
DB search
MFKQLAALLLASSTILPGCYLERDINYVRPEQPLVKKKTVSQLIHYKSKQRVKLTTKEVF
DLKVKVKQAQKAQDIRVNIIGHHLKTMRENAQTKARINHLIRVLNRLGVPSSSIQIFDKI
NAPNAQLKWEPDMIAIELEWYDRHAIQCPGWDQVMDGHVAPEGEENFGCTTQSNLARMIV
DPKDLIVGKNLESTDGQYSSMSIERYQTDKMKTIKIEKVGKGR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacaattagcagccctactattagcgtcttctactatattacctgggtgttat
cttgagcgcgacataaattacgtacgtcctgaacagcctttagtaaagaaaaaaacggtt
tctcagttaattcactataaatcaaaacagagagttaagctcaccacgaaagaggttttt
gatctcaaagttaaggttaaacaagctcagaaagcacaggatattcgagtaaacattata
ggtcatcacttgaagacaatgcgagaaaatgctcaaacaaaggctcgtataaatcattta
attcgagttcttaatcgattaggtgttccaagttcttcaatccaaatctttgataaaatt
aatgcgcccaacgcccagttaaaatgggaacctgatatgatagctattgaactagagtgg
tatgatcgccatgctattcaatgtcctggatgggatcaagtgatggatggtcatgttgcc
cccgaaggagaagaaaattttggctgcacaacgcaatctaatttagcgcgaatgattgtt
gatccaaaagatttgatagttggtaagaatttagaaagtactgatggtcaatatagtagt
atgagtattgagcggtaccagactgataaaatgaaaacaataaaaattgagaaggtcggc
aaggggagatag
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