Candidatus Paracaedimonas acanthamoebae: IM40_04290
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Entry
IM40_04290 CDS
T03240
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM40_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_04290
Enzymes [BR:
caq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
IM40_04290
DNA repair and recombination proteins [BR:
caq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IM40_04290
Prokaryotic type
IM40_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
HHH_8
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AIL12905
LinkDB
All DBs
Position
complement(823461..824528)
Genome browser
AA seq
355 aa
AA seq
DB search
MKEYHDALLSWYDNEGRILPWRARGEQTINSYHVWLSEIMLQQTTVATVIPYFLSFIQRW
PTFQQLAEASLDDILHAWQGLGYYARARNLHLCAKKIANDYTGKLPTNSDELIKLPGIGP
YTAKAIAAIAFNEHVLPVDGNIARILSRMYAISIPLPNGMPEIQNAASAFTPVTRPGDFA
QAMMDLGATICVPRTPSCEKCPFQPTCKAHALGIAAELPLKNKKRVRPQKYTVAYILKRE
DGAILLRKRPENGLLGGMMAVPTSEWQLEKLEGKNIGRDAPFITHWKSLKSHINHSFTHF
DLEVEPYYGSICAKKAKILDGDWVFPHQLNHYALPKLFKKIIEISLSKLSTIDVV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatatcatgatgctcttttaagttggtacgataatgaaggaaggattcttcct
tggcgagccagaggtgagcaaacaataaattcttatcatgtatggctaagcgaaattatg
ttgcaacagactacagtcgcgactgtaattccatattttttatcatttattcaacgatgg
cctacatttcaacaattagctgaagcttcccttgatgatattcttcatgcatggcaaggc
ttggggtactatgcaagagcaagaaaccttcacctctgcgcaaaaaaaattgcaaatgat
tatacaggcaagcttccaacaaattcagatgagttaataaagcttcctggtataggacct
tatacagcaaaggcaattgccgctattgcctttaatgagcacgttttacctgtggatgga
aatattgcccgtatcctttcacggatgtatgctatttcaatacctcttcccaatggaatg
ccagaaatacaaaatgctgctagtgcatttacacctgtaacaagacctggggactttgcg
caagctatgatggatctaggagcaactatttgcgtacctagaaccccttcatgcgaaaag
tgtccttttcaaccaacttgtaaagctcatgcattaggtatcgcagcagaactccctttg
aaaaataaaaagcgcgtaagacctcaaaaatacacagtagcttatattctcaagagggaa
gatggtgcgatcttattaaggaaaagaccagaaaacggattacttggaggaatgatggca
gttccaacatctgagtggcaattggaaaaactagaaggtaaaaatattgggagagatgct
ccttttataacacactggaaatctcttaagagccatataaatcatagttttacacatttt
gatcttgaagttgagccttattatgggagcatttgtgctaaaaaagcaaaaattttagac
ggtgactgggtttttccgcatcaattaaaccactatgctctaccaaaattattcaaaaag
attattgaaataagtttaagcaaattgagcaccattgacgttgtttaa
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