Candidatus Paracaedimonas acanthamoebae: IM40_06950
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Entry
IM40_06950 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_06950
Enzymes [BR:
caq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM40_06950
DNA repair and recombination proteins [BR:
caq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IM40_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AIL13290
LinkDB
All DBs
Position
complement(1318147..1320852)
Genome browser
AA seq
901 aa
AA seq
DB search
MSMILAPSKLRFAPLKQLSWQLYHMCQEEPLQISKAIVFLPSRRAKRQFIEELQSFFPEM
TFIFPHVSTLRDWVNQTDSLPCMLPPPVSFFERELHYIHLLKPYVREESQAGQFAESLAA
LHDEFIFAEVPFEKTKNLIPETFAAHWQQNLKYLEVIKDQWPHFLRRIGRSDPCVHFVQL
LNEQIEAWKDNPPQAPVIAAGFEADIPVVGRFLEAIEQLPKGKVYQENFWNNSEEKTILN
LFSCKMQTPQAEKQEEVFQTDMLTQKLHLGEFSSLEEEARVIAILMRERLEETDKIIALV
TPLRALAQRVISELARWNLNVDDSYGKSLSDIPLGVFLRLSLKCVLKDFESIPFLSFLKH
PYMSQTYKMHIGKLETQYLRGQLFASNIFSLLKEIPKGTELYKFLLSLQEWAAPLKHLLF
QKTIILKDLVTAHLQFIEILSRNTFEHHRGYKEFTEQLKGLEGALNNLKIKGTDYPFILE
KLLSQVTLRPLYGVHPRLHIWGPLEAQLQSVDCIIVGGMNEKNWPGYYQQSAWLNESMRN
ILGLQTRTMWYELKKRLWINLLRAPEVILTRALREEGQLEAASRWWLGLLARLKAKGQYE
RHQLNPVYQQWARLLDYPAERKVLSRPAPCPPLEARPRTLSATQIETWIRDPYSIYAREI
LNLKPLASLEPALGPALFGVMIHQILEAFFKQGYEVQDQQAYEILRNLGKHTFGESLNHP
VVSSFWWTRFNRLIAWFLEVERALSPSKRFAEVRGEIFLKGPQGLFKLKATADRIDLNID
GTACIVDYKTGGLPTRKEIKQGVMPQLPLEAAILQKGGFQEIDPHTSIVMRYMHLSGGQP
PGMILDIPGGTLIEKALESLQTMINQYDDPKKPYLSCPNPEIAPAFSPYSHLSRIQEWQR
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgattctggcgccatctaagcttcgttttgctcctttaaaacaactttcttgg
cagctttatcatatgtgccaagaggaacccttgcagatttctaaagctattgtttttctt
ccttctcgccgtgcaaaacgacaatttattgaagaattacaaagtttttttccggagatg
acgtttatttttcctcacgttagcactttaagagattgggtcaatcaaacggatagtctt
ccatgcatgttgcctcctccagtttctttttttgagcgtgaattacattatattcacctt
ttaaagccgtatgtacgcgaggaatcacaagcaggccagtttgcagaatctcttgcggct
ttacatgatgaatttatttttgctgaagtaccctttgagaagacaaaaaatttaattcct
gagacttttgccgctcactggcaacagaatttaaagtacttggaagttattaaagatcaa
tggcctcattttttaagaagaataggtcgaagtgacccatgtgtgcattttgtgcagcta
cttaatgaacagattgaggcgtggaaagacaatcctccacaggcgcccgtaattgctgca
ggctttgaggcggatattccagttgtggggaggtttcttgaggcaattgaacaactaccc
aaaggaaaagtatatcaagaaaatttttggaataactctgaggaaaaaacgattcttaat
ttgttttcttgtaagatgcaaacccctcaagctgaaaaacaagaagaagtatttcaaaca
gatatgcttactcaaaaacttcatttaggagaattttcctctctagaagaagaggcgaga
gtcattgcaatcttgatgagagagcgccttgaggaaactgataaaataatagccttagtg
actcctctgcgtgctctagcacaacgtgttatttcagaactggcccgttggaatctaaat
gttgatgactcttatggtaagagtttatccgatatacctttaggtgtttttttgagatta
tcacttaaatgtgttttaaaagatttcgaaagtattccctttttaagctttcttaaacac
ccatatatgtcacaaacctataagatgcatataggaaagcttgaaacacagtatttacgt
ggtcagttgtttgcaagcaatatattttctcttttaaaggaaattcctaaaggaacagaa
ctctataaatttttactctctcttcaagaatgggccgcgccattaaaacacttactcttt
cagaaaactattatattaaaagatttagtcacggcacatctgcagtttattgagattttg
tcgcgtaatacttttgaacatcatagaggctataaagaatttactgagcaactaaaaggg
ctggagggggctttaaataatcttaaaataaaggggacagattatccatttattttagaa
aaattactcagccaagtaacacttaggccactttatggggtccatccaaggctgcatatt
tgggggcctcttgaagcccaattacagtcagttgattgtataattgttggtggaatgaat
gagaaaaattggccagggtactatcaacaaagtgcttggttgaatgaaagtatgcgcaat
attctaggtcttcaaacgagaaccatgtggtatgagctaaaaaagcgcttgtggattaac
cttttaagagcgcctgaagttatcttgacgagagctttacgcgaagaagggcaacttgaa
gctgcatcaagatggtggctagggttattggcgagactcaaagccaaaggacaatacgaa
aggcatcaattaaatcctgtttatcaacaatgggcaagattattagattatcctgcagaa
cgaaaagtattatctcggccagcgccttgtcctcctcttgaagcacggccgcgtactctg
agtgcaacacaaattgaaacgtggattcgtgatccctattctatctatgcgcgagaaatt
ttaaatttgaagcctcttgcatctttagaaccagcgctaggaccagctttatttggggtc
atgatacatcagattctcgaagcattctttaagcaaggatatgaagtacaagatcaacaa
gcgtatgaaattcttcgtaatttagggaagcacacttttggagaatctttaaatcatcct
gttgtttcttcattttggtggactcgttttaatcggcttatcgcctggttcttagaagtt
gagcgagctttatcgccatcaaaaaggtttgctgaagttcgcggtgaaatttttcttaaa
ggaccacaaggactttttaaacttaaagcgacggcagacagaattgatctcaatattgat
ggtacagcttgtattgttgactataaaactggagggctaccaacccgaaaagaaatcaaa
caaggggtaatgccgcagcttccacttgaggctgctattttacaaaagggtggctttcag
gagatcgatcctcatacttcgattgtgatgcggtatatgcatttatcaggaggacagccc
ccaggcatgatcttagacattccaggaggcactcttattgaaaaggctttagaatcactt
caaactatgattaatcagtatgatgatcctaaaaaaccttatttatcatgtcctaatcct
gaaattgcgccggcattttcgccttattctcacttgtcaaggattcaagaatggcaacga
ttgtaa
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