Candidatus Paracaedimonas acanthamoebae: IM40_07655
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Entry
IM40_07655 CDS
T03240
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM40_07655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_07655
Enzymes [BR:
caq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IM40_07655
DNA repair and recombination proteins [BR:
caq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IM40_07655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6866_N
Motif
Other DBs
NCBI-ProteinID:
AIL13397
LinkDB
All DBs
Position
1449597..1450379
Genome browser
AA seq
260 aa
AA seq
DB search
MKIVTWNVNSIKARLPIVINWLRENAPDIVLLQEIKCENSAFPSEFFEDLGYNIALHGQK
TYHGVAILSKLPIEDVVRGLPDFEDTQSRYIEALVGSMRVSSIYVPNGQEVGSDKFHYKL
SFYKKLKAHMKKSLEAKEIAIWGGDYNVAPFLADGPNEEAFKGERILTSQKEREAFRELL
WLGITDAIRVQYSEESLQGQHLFSWWDYRANSWAQNKGFRIDHLLLSPQAADRLESAGIN
SEVRALEKASDHAPVWIKLR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtgacatggaatgttaactccattaaggcacggcttccgatagttataaat
tggcttcgcgaaaacgcacctgatattgttttgctgcaagaaattaaatgtgaaaattct
gcttttccctcagagttttttgaggatcttggctataatattgcgctgcatggtcagaaa
acttaccatggtgtcgccattttatccaagttgcctatcgaagatgttgtacgaggcctg
ccggactttgaagatacgcaatcgcgttatatcgaagctttagtaggctctatgcgcgtt
tcatccatttatgtacctaacggccaagaagtagggtctgacaaatttcattacaagtta
agtttctataaaaagctcaaagctcacatgaaaaaatccttagaagcaaaagagattgct
atttgggggggtgattataatgtggctccttttcttgcagatggacctaatgaagaagct
tttaaaggagagcgaattctaacaagccaaaaggagcgagaggcttttcgagagcttttg
tggttgggaatcacggatgcaattcgtgttcaatactcggaagaatctcttcaaggtcaa
catctcttcagttggtgggattatcgagccaattcatgggcacaaaataaaggatttcgt
atagatcatcttctgctttcaccacaagctgctgatcgtttagaatcagcaggaattaat
tctgaagtacgcgccctcgagaaagcatctgatcatgcccctgtctggataaaattacgt
taa
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