Candidatus Paracaedimonas acanthamoebae: IM40_08725
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Entry
IM40_08725 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM40_08725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_08725
DNA repair and recombination proteins [BR:
caq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IM40_08725
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IM40_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIL13546
LinkDB
All DBs
Position
complement(1636077..1636820)
Genome browser
AA seq
247 aa
AA seq
DB search
MQWKDQGIIIALKRLGEDKIVATLLTSAHGRHMGVTRLSKKAEQVFHLGNLCEATWQARL
PEHLGTWRLENIHSAFAMTFQNPIRLEALATACALIDAILPEREHQEEIFHIFQKFTYNL
AQENWAWFLVDLELTLLKYAGIALDFSTCVATGSKQDLTFISPRTGRAVSKIAGSPYQDR
LLKLPPCLTESKRHEISLSSKELLAVLELNEYFLNRYLFGLHGLKLPAARERFKNRLARQ
TYILRPE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtggaaggatcaaggtattattattgcgcttaagcggcttggcgaagataaaatt
gttgccactctgctgaccagtgcgcacggtcgccatatgggggtcacacgactgagtaaa
aaggcagaacaagtttttcaccttggtaacctttgtgaggccacttggcaagctcgcttg
cctgaacatctaggtacttggcgccttgaaaatatccatagcgcctttgcaatgactttc
caaaacccgatacgacttgaagcccttgcgacagcttgtgcccttattgatgctattctt
cctgaacgcgagcatcaagaagagatttttcacatttttcaaaaatttacttataattta
gctcaagaaaattgggcatggtttttggttgatcttgaactcactctccttaaatatgcc
ggtattgcgctagatttttcaacatgcgtcgctacaggaagtaaacaagatcttaccttt
atatctcctcgaacaggacgagctgtttccaaaattgctggttctccctatcaagatcgt
cttttaaaactccctccttgcttgacagaatctaagaggcatgagatttctctttctagt
aaggagcttttggcagtgcttgaattaaatgaatattttttaaaccgttatttattcggt
cttcatgggttgaaattacccgcagctcgcgagcgctttaaaaaccgactagcacgacaa
acttatatattgaggccagaatga
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