Candidatus Paracaedimonas acanthamoebae: IM40_08875 Help Entry IM40_08875        CDS       T03240                                  Name (GenBank) hypothetical protein   KO K11904   type VI secretion system secreted protein VgrG Organism caq  Candidatus Paracaedimonas acanthamoebae Pathway caq03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:caq00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     IM40_08875  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:caq02044]     IM40_08875 Secretion system [BR:caq02044]  Type VI secretion system   Imp/Vas secretion system core components    IM40_08875 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 Gp44-like_2nd PrkC-like_PASTA-like Motif Other DBs NCBI-ProteinID:  AIL13567 LinkDB All DBs Position complement(1659923..1663012) Genome browser AA seq 1029 aa AA seqDB search MVSTTLVRQKPISLKIDIDYQGEEESSLPENLPLHRRTDISSKTEKRFENQRKNSESREG AVERRQMDRRTSLSQSDFSTTDNRNRHLVLQQFQGIETISEPFEYTVLMISDDPAINFAD MIGKTVTISIDCHEKHTNASQGKDGQQGAKQYREEDTAEEGKRYIKERGINQDQDFLADE DSSPQEESPTIRYFNGVIGQFTQLHTARKSDDNVTYYEAKIYPQLWMLKFTQDCRIFQNQ SAIDIIKQVLRENGVLEIEDKTKDCGRTPREYCVQYNESSFDFISRLLEEEGIFYYFKHK HGQHTLVLGEAPSSHEDCPGAQTAEFEKAVAGVDYFNKLITCKVLERVVPKSHSLVDYNF TTASTKISSLSNGTGLGGKVYSYPGLFDHEDLPKQVKLETVSTLRIQADELPSKSVDATS TIPFFAPGYKFQMRGHTRKDVNKLYVLHTVIHEANITGGLGVHDSHYRNQFTAFPFSIAY KTGIKTPKPKIYSTQTARVTGPKNEEIWTDQYGRIKVRFHWDIQSNGTDVGKGSQLEKET QNEQDPSETHNAQEDGNIKDEQDSSCWVRVAEGWAGNNWGILFTPRVGMEVVVTFLEGNP DRPLVIGTVYNSDNMPPYLPEQPTKSTIKSRSTKKGPEGFNELRFEDLKESEEVFFHSQK DLTIRVNETVNDWVKKGSYWWWIDRGNREVVLAGEDESVSKTTPKGQDLPAGKGDDNLTL LKGSRTMQLKSEEDANYNILINQGDRYLEIEEGNNLELLNKGDYFIQQKEGNSDHFIEKG DATLTLEKGNIHTHLSEGNITTHLTKGDHSLVLKEGNDYKELTNGDATLLVKEGLFFEKI KSNYTTIVEEGNQEISIQQGTQAIMVQGDQSVTLQANQTIKVAGDVEESITGNYTLKIDG NFEIIVGGTVTIKSTGAATFQSEAATTLESGTEMTVNAGAAMTISAEGETTMSAAGLTLT SEGATTFESTGETTLNASEVNVVAETELMLEGTAGVTMSGAVVTVAGEATATIGGEGSTQ ITGAAVTLA NT seq 3090 nt NT seq  +upstreamnt  +downstreamnt atggtttcaacaacgcttgtacgtcaaaaacctatttcgctaaaaattgatattgattat caaggtgaagaagaatcaagtcttccagaaaatctaccgcttcatcgcaggacagacatt tcttcaaaaacagaaaagcggtttgaaaatcagcgtaaaaatagtgagtcccgcgaagga gcggtagaacgccggcaaatggaccggcgcacctctctatctcaaagcgatttttctacc acagacaatagaaatcgtcatctcgtcttgcaacaatttcaggggattgaaacgatttca gaaccttttgagtataccgttcttatgatttcagatgacccagcgattaattttgctgat atgattgggaaaacggtaacaatttcaattgattgtcatgaaaaacataccaatgcttct cagggaaaagatggacagcaaggggctaagcaataccgtgaagaagatactgcggaggag ggaaagcgctatattaaagaacgaggaattaaccaagaccaagattttctagcagatgaa gattcttctcctcaggaagagagcccaacaattcgttattttaatggtgttattgggcaa tttacgcagcttcacacggcgcgtaaaagtgatgacaatgttacttattatgaagcaaag atttatcctcaactctggatgctaaaattcacgcaagattgtcgtatttttcaaaaccaa tcagccattgatatcatcaaacaagttttgagagaaaatggtgtccttgaaatcgaagac aaaacgaaggattgtggtcgcactccacgtgaatattgcgttcagtataatgaaagctct tttgattttataagtcgtcttctcgaagaagaaggaattttttactattttaagcacaag catgggcaacatactttagttttgggtgaagcgccttcaagtcatgaggattgcccaggg gctcaaacagcggaatttgagaaagccgttgcaggcgttgattatttcaataagctgatc acttgtaaagttcttgagcgagtagttcccaaatctcattctcttgttgattacaatttt acgacggcttcgaccaagatttcgagcttatcaaatgggactggattagggggaaaggtt tactcttatcctgggctttttgatcatgaggacctgcccaaacaagttaagctagaaaca gtttcaacattgagaattcaagcggatgaattaccgagtaaatcagttgatgcaacatca accattcccttttttgcacctggctataagtttcaaatgcgaggccatactcgaaaagat gttaataagctttatgttcttcatactgtgattcatgaagccaatataacaggtggtcta ggggttcatgatagtcattatcgcaatcagtttacggcatttccttttagtattgcttat aaaactggcatcaagacacccaagcctaaaatttattcaacccaaacagctcgtgttact ggacccaaaaatgaagaaatttggacagatcaatatggtcgcattaaagttcgatttcat tgggatatccaatcgaacgggactgatgtcggtaaaggaagccagctagaaaaagaaaca caaaacgaacaagatccatcagaaactcacaacgctcaagaggatggaaatattaaagat gaacaagatagctcttgttgggttcgggtggctgagggatgggcaggaaataattggggg attcttttcacaccacgggttgggatggaagttgttgtaacgttccttgaagggaatccg gatcgtcctctcgtgattgggactgtttataattcagataacatgccgccatatcttcct gaacagcccacaaagagtacgattaagagccggtcaacaaagaaaggaccagaaggcttt aatgagttaagatttgaagatttaaaagaatcagaagaggtcttctttcattcacaaaag gatttaacaatacgagtgaatgagacggttaatgattgggttaaaaaaggaagctattgg tggtggattgatcgtgggaatcgagaagttgttttagccggagaagatgagtcggtctct aaaacgacaccaaaaggccaagatcttcctgcagggaaaggagatgataatcttactctt ctcaaaggaagtcgtacaatgcagcttaaaagcgaggaagatgccaactataacatcctt atcaaccagggtgatcgttatcttgagattgaagaaggaaataatttagaacttctgaac aaaggggattattttatccaacaaaaagaaggaaattcggatcattttattgagaaaggg gatgcaacacttacgcttgaaaaaggaaatatccacactcatttaagtgaagggaatatc accactcacctgacaaaaggggatcactctcttgttctaaaagaagggaatgattacaaa gagctaacaaatggggatgcaactcttcttgtgaaagaaggacttttctttgaaaaaatt aaaagcaactacacaacaattgttgaagaaggtaaccaagaaatttctattcaacaaggc acacaagcaattatggttcaaggtgaccaatccgtaactttacaagcaaaccaaacaatt aaagtggcaggggatgtagaagagtcaattacaggcaactatacgcttaagattgatggt aattttgaaattattgtaggcggcacggtcactattaaaagcacaggcgctgcaactttt caaagtgaagccgcaacaacgcttgagtctggcactgaaatgacagtaaatgcaggtgcc gcgatgacgatctctgcagaaggagaaacgacaatgtccgcagctggcttaacccttacc agtgagggagcaaccacgtttgaatcgacgggcgaaacaacattgaacgcttctgaagtt aatgtggtggctgaaactgagcttatgcttgaaggaactgcaggtgtgacaatgtcagga gccgttgtcacagttgcaggtgaggctacagcaaccataggaggagaaggcagtactcag ataacaggcgcagcagttacattagcttaa

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