Candidatus Paracaedimonas acanthamoebae: IM40_09835
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Entry
IM40_09835 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caq03032
]
IM40_09835
03036 Chromosome and associated proteins [BR:
caq03036
]
IM40_09835
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_09835
DNA replication proteins [BR:
caq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IM40_09835
Chromosome and associated proteins [BR:
caq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IM40_09835
DNA repair and recombination proteins [BR:
caq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IM40_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
Motif
Other DBs
NCBI-ProteinID:
AIL13712
LinkDB
All DBs
Position
Plasmid_00001:134221..134493
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELINEIAKVVASKQEAEQGFKAIFESIKEALQKGEEVRLTGFGSFKVNGRAARTGR
NPRTGAEIKIAASKVPTFKPGKELKDAVNV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgagcttataaatgaaattgcaaaagtcgttgcctctaaacaagaagct
gagcaaggttttaaggctatctttgagtccattaaagaagctctccaaaaaggggaagaa
gttcgcctcacaggatttggaagcttcaaagtgaatggaagagctgctcgtacaggcaga
aatccaagaacaggtgcagagattaagattgctgcaagcaaggttcctacttttaagcca
gggaaagaactgaaagacgcggttaacgtttaa
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