Candidatus Paracaedimonas acanthamoebae: IM40_10825
Help
Entry
IM40_10825 CDS
T03240
Name
(GenBank) transposase
Organism
caq
Candidatus Paracaedimonas acanthamoebae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_38
HTH_7
rve_3
TnsD
HTH_23
LacI
Sigma70_r4_2
HTH_31
HTH_40
HTH_3
HTH_29
HTH_11
HTH_Tnp_ISL3
HTH_50
GerE
HTH_24
HTH_Tnp_IS1
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AIL13851
LinkDB
All DBs
Position
Plasmid_00003:complement(105437..106471)
Genome browser
AA seq
344 aa
AA seq
DB search
MIEWEQTMELKILRRQGKSLRQIAREVGVSVNTVVKYLKHEGAVLYKSRPCKVKKLDVYK
DYLRQRISSALPLKLPATVLLREIQQQGYQGGMTQLRLYLRSQSPVSIQEEERRFETLPG
QQMQVDWVEFRKSPSFLAAFVATLGFSRYSYVCFVRDEKLETLIECHKEAFEYFGGVPYE
VLYDNMKTVILERDTYGVGKHRFNPGMLDFARHYGFQLKVCRPYRAKTKGKVERFNRYVR
YSFYNPLVSHLKMANLRLDRETANVEVLKWLRDVANVRIHGTTGEIPAQRLQEEQKYLQP
LPSPYCGDFKTARAARIEETDLSSFCSQPLQHPLSVYQQVLEAL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatagagtgggaacaaacaatggaactaaagatattacgccgccaagggaagagctta
cgccagattgctcgagaagttggtgtttctgtgaatacagttgtgaagtatttaaagcat
gagggggctgttttatataagtcgagaccttgcaaggttaagaagcttgatgtttataaa
gattacttacgtcaaaggataagctcagccttacctctaaagttaccagcaactgttttg
ttgagggagattcagcaacaaggctatcaagggggcatgacacagctgaggctttattta
aggtcacaaagtcctgttagtattcaagaggaagaaaggcgctttgagactttacctggt
caacagatgcaagttgattgggtagagtttaggaagtctccttcctttttagcggctttt
gtcgcgactttaggttttagccgatattcttatgtttgctttgtgcgggatgagaagctg
gagacattgattgaatgccataaggaagcttttgagtattttggcggggttccttatgaa
gttctttacgacaatatgaagacagtgatccttgagagagatacttatggggtgggcaag
catcgctttaatccaggcatgcttgattttgcaagacactatggctttcaactcaaagtg
tgccgcccttacagagccaaaaccaaagggaaagttgagcgatttaatcgttatgtgcgt
tatagtttttataatcctttagtgtctcacctcaagatggctaatcttcgcttggataga
gagacagccaatgttgaggtcttaaagtggctgagagatgttgcgaatgttcgcatccat
ggaactactggagagattccagctcaaaggcttcaagaagagcaaaaatacttgcaacct
ctgccttctccttattgtggagactttaagacagctcgcgctgcaaggatagaagaaact
gatctctccagcttttgcagccaaccccttcagcatcctctttctgtttaccaacaagtg
ttggaggcgctatga
DBGET
integrated database retrieval system
