Candidatus Chazhemtobacterium aquaticus: MICH65_0286
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Entry
MICH65_0286 CDS
T06470
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
caqa
Candidatus Chazhemtobacterium aquaticus
Pathway
caqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICH65_0286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caqa03019
]
MICH65_0286
03016 Transfer RNA biogenesis [BR:
caqa03016
]
MICH65_0286
Enzymes [BR:
caqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MICH65_0286
Messenger RNA biogenesis [BR:
caqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MICH65_0286
Transfer RNA biogenesis [BR:
caqa03016
]
Prokaryotic type
tRNA degradation factors
MICH65_0286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
RNase_PH_C
KH_PNO1_2nd
KH_KhpA-B
KH-I_KHDC4-BBP
S1_RRP5
SPATA25
KH_2
S1_2
PNPase
OB_RRP5_4th
Ribosomal_L6
WHD_ROQ1
Motif
Other DBs
NCBI-ProteinID:
QHO63267
UniProt:
A0A857N555
LinkDB
All DBs
Position
282542..284779
Genome browser
AA seq
745 aa
AA seq
DB search
MTQNPSLSTTISLDGTQDITIEANRFAPQAAGSALVRSGDTVVFAAVVSGKPKADVDFFP
LTVEYREKHYAGGIISSSRFIKRESRPSDNEILTARLIDRSIRPLFPKGFYDDVQVIVSP
LSIDQESEPEILSIIAASAALSFSSLPWEGPIGAVRVGMDDKGHFLINPTNSQKTNSKLD
LVVSGAQGSIAMVEAGAHEVNESTVLEALDHGQKNIDLIIKAISDLAAKLGKSKLQVEPE
KFDATLVKLVEDKLDVNQILSDSKTNGGEGINISNLVDQLINDDQEIDRIQVAKLIDDRI
RNAIRSQLLDKNTRFDGRAIDEIRQLSSEVSLLPRTHGSALFMRGLTHVLSTVTLASPGS
EQLIEGMKGEQTKRYMHHYNMPPYATGEPGRIGGPNRREIGHGALAERALEPVLPSQDQF
SYTIRVVSEVLSGNGSTSQASVCGSTLALMDAGVPIKKPVAGIAMGLITDGKKYITLTDI
AGLEDHFGDMDFKVAGTVDGITAIQMDVKVTGVSAQVLKDALEQARVGRLAILENMKKTI
DQPRSQLSPFAPRVVTLQIDPTKIGVVIGPGGKTIRPIQEDLDVEINIEDDGLVSITGTN
PENVNQAKKMIEDLTAEVEVGKVYSGKVQRIQPFGAFVEILPGKDGLVHVSNMGKEFVSD
PHQLVKEGDQVQVKVFEIDSQGRVNLTMNLDDNPASRDRTTSPRRESRQDQSSRPSQTRS
SRPRTSNKPGATRNESRFSRFNDKR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaacccatctctatctaccaccatctcacttgatggtacccaagatattact
atcgaagctaatcgttttgctccccaagcggccggatccgcccttgttcgctccggcgac
actgtcgtctttgcggcagtggtttccggtaaacccaaggcagacgtcgacttctttcct
ctcaccgttgaatatcgtgaaaaacactacgccggtggcataattagcagtagccgtttc
atcaaacgcgaaagtcgtccttctgataacgaaatcctcaccgctcgtctgattgatcgt
tctatcagacccctatttcctaagggtttttacgatgatgttcaagttattgtcagcccc
ctgtctatagatcaagaatcagaaccagaaattctttctatcatcgccgcctctgctgca
ttaagcttttcctcacttccttgggaaggtcccattggggccgtacgagttggtatggat
gacaagggccacttcctcatcaatcccaccaatagccaaaaaacaaactccaagctcgac
ctcgttgtttcaggtgcccaaggatctattgccatggttgaagcaggtgcccatgaagtt
aacgaatctaccgtccttgaagccctagatcatggccaaaaaaatattgacctaatcatc
aaagccatctctgatttagctgcaaaactaggtaaatcaaaacttcaggtcgagccagaa
aaattcgatgcaactctagtcaaacttgttgaagacaaacttgatgtcaatcaaattctc
tctgatagtaaaaccaatggcggcgaaggcattaacatttcaaatcttgttgatcagcta
atcaacgacgatcaagaaatcgaccgcattcaggtggccaagctcatcgatgatcgtatt
agaaacgccatccgttcccagttgcttgataaaaacactcgttttgatggtcgtgccata
gatgaaatacgccaactctcttccgaagtaagcctcttgccccgcacacacggatcagcc
ctctttatgcgtggacttactcacgttctttccactgttactctcgcctctcctggttct
gagcaactcatcgaaggcatgaagggcgagcaaaccaagcgctacatgcaccattacaac
atgcctccctatgcgaccggtgaacccggaagaataggtggtcccaaccgtagagaaatt
ggtcatggagccttagccgagcgagccctcgagcctgttctaccctcacaagatcaattt
tcttacaccatcagagttgtttctgaagtactaagcggcaatggtagcacctcccaagcc
tctgtctgtgggtctacccttgctctaatggacgccggagtacccatcaaaaaaccagtc
gctggcatagccatgggcctaatcaccgatggtaaaaagtacatcaccttaactgatatt
gcaggacttgaagaccattttggagatatggacttcaaggtagctggaaccgttgatggt
ataaccgctattcaaatggacgtcaaggttactggtgttagtgcccaagtacttaaagac
gctctcgaacaagccagagttggtcgtcttgccattcttgaaaatatgaaaaaaaccatt
gatcagcctcggtctcagctttccccatttgcccctcgcgttgttacattacaaattgac
ccaacaaaaattggtgtagttattggccctggaggtaaaaccattcgcccaattcaggaa
gatcttgacgtcgagatcaatatcgaggatgacggactagtcagcatcacgggtacaaat
cctgagaacgtcaatcaagccaaaaaaatgatcgaagatcttaccgccgaggttgaagtt
ggtaaagtctattccggaaaggttcagcgaattcagccttttggagcttttgttgaaatc
ctccccggtaaagacggtctcgtccatgttagcaacatgggtaaggagtttgtctctgat
ccacatcaactagtcaaagaaggcgatcaggttcaggtcaaggtttttgaaatagactct
caaggtagagttaacctcaccatgaatcttgatgacaatcctgccagtcgagacagaacc
acttctccacgaagagaatcgcgtcaagaccaatcatctagaccctcccagactagatca
agccgaccgcgcacctcaaacaaaccaggtgctaccagaaatgagtctcgcttttctcgt
ttcaacgacaagcgctaa
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