| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
caqa Candidatus Chazhemtobacterium aquaticus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:caqa00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MICH65_0300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:caqa03021]
MICH65_0300
03400 DNA repair and recombination proteins [BR:caqa03400]
MICH65_0300
Enzymes [BR:caqa01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MICH65_0300
Transcription machinery [BR:caqa03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MICH65_0300
DNA repair and recombination proteins [BR:caqa03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MICH65_0300
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
301408..305139
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| AA seq |
1243 aa
MTNNLKNLMDFQGLQIKLASPEEIKSWSHGEVTKPETINYRTLKPEKDGLFCERIFGPTK
DWECYCGKYKRIRYRGIVCDKCGVEVTLSRVRRERMGHISLAAPVAHVWYFKGTPSTLSL
LLNISPKKLASVVYFSRYLVLNVDKDEKQNALKKLEDARQAQKDQIKSDADQQIETIKSE
GKTQVETLRRSISNKDEKNLKTESAKLETKKKIAATREQMVAEQTVTDNIYDTIESLVKQ
IETNSVLTEDEYLKLVDYDAASFLTVGMGAEALLEAVKKVNLEELANKLKTIIKDGSVGK
KLKATKRLKVVMGLINASVSPEWMIFRQLPVIPPDLRPMVQLSGGRFATSDLNDLYRRVI
NRNNRLKHLLSLGAPEIILRNEKRMLQEAVDALIDSPQSLASRRTRRTKPLKSLSEMLKG
KQGRFRQNLLGKRVDYSGRSVIVVGPELSLNQCGIPKDMALEMFKPFVMRELIAKGLAPN
VKSAKNLIEHRIPEVYDILEEITKNHPVLLNRAPTLHKLSILAFNPVLIEGSAIRLHPAV
TDGFNADFDGDQMAVHVPLTKKAQEEARNQMLPQHNLLKPSVGKPVAIPAKKEMAIGVYY
LTSIEENQEANQDTIYADPKEVLLAYNIGLLHLRQPVQLRLNGKVIITTPGRIIFNEVVP
QEFGYINETITSSTIKSLFARSIKELGSDRVVKLIDDIKDIGFEAGTISGLSFAISDNEL
YQKKQAVIQQGNQQVAQVEQNYAQGLITDQERRRLSNEVWMRITDELSDLTWETFRPGNP
IRLIIETGMGRITRDTIKQLSAMRGLVTDPLGNIVELPIKGNYREGLSIFEYVNSIRGSR
KGLIDTALKTADAGYLTRRLVDASHDAIIREQDCGTKDGITISTQGPRGDKFADRLVGRF
TLKKILHPKTKKQILSANQIIDDEAVKQIIEANITEVEVRSPLTCESRFGVCVHCYGLNF
ANLEITQIGDPVGILAAQSIGEPGTQLTMRTKHTSGSVGLDVTQGLPRVTELLEVRTPKN
LSPIAEVAGKAKILETDSGYRITITPTIGGKDQRREYLVPLTSVLNIEDGQLVPAGHPLA
SGNLDVKQVLKVKGLRAAQEYLVNEAQRVYESQGIPIKDKHFEVIVKKMSDKVKIETPGD
TDLLPGQVVSRGRFDAINESVIAEGGQPATAGVLILGLIQSSLYTESWLSSASFQDTTKV
LTRAAIEGDTDPLLGMKENVIIGRLIPTNAERAEIKDGLLVNQ |
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| NT seq |
3732 nt +upstreamnt +downstreamnt
atgaccaacaatctaaaaaatctaatggactttcaaggacttcaaattaaacttgcctct
ccagaggaaatcaagtcctggtcacacggtgaagtcaccaaacctgaaaccattaattac
cgcaccctcaaacctgaaaaagacggtctgttttgtgagcgcatctttggaccaactaaa
gactgggagtgttattgtggcaaatataaacgcattcgttatcgtggcatagtctgcgat
aaatgtggagtagaagttactctctctcgtgttcgtcgcgaaagaatgggtcacatttcc
ttagctgctccagttgcccatgtctggtatttcaaaggcaccccgtctaccctttccctc
cttcttaatatctcacccaaaaaactagccagcgttgtttatttctcacgatatcttgtt
ctaaatgtggacaaagatgaaaagcagaatgctcttaaaaaacttgaagatgctcgtcaa
gctcaaaaagaccaaattaaatctgatgctgatcaacaaattgagaccattaagtcagag
ggtaaaactcaagtggaaactcttcgtcgctctatctccaacaaagacgaaaaaaacctc
aagaccgaatctgccaagctcgagactaaaaagaaaattgccgccactcgcgaacagatg
gtcgccgaacaaaccgtcactgataatatctacgacaccatagaaagtcttgtcaaacaa
atcgaaaccaactccgtcttaaccgaagacgaatatctcaaacttgtcgattacgatgcc
gcgtccttccttactgttggtatgggcgccgaagccttacttgaagctgtcaaaaaagtt
aaccttgaagaacttgctaataaacttaaaaccatcatcaaggatgggtctgtcggtaaa
aaactaaaagcaaccaaacgacttaaggtggtcatgggtctgatcaatgcttctgttagt
cccgagtggatgattttccgccaactacccgttattcctccagacctccgtcccatggtt
cagctttcaggtggacgctttgccacctccgaccttaacgacctatatcgcagggtcatt
aatcgtaacaatcgtctaaaacaccttttaagtctaggtgcccccgaaatcatattacga
aatgaaaaaagaatgcttcaggaagctgttgatgccttaattgattcccctcaatcgctc
gcctctcgtcgtactcgtcgcaccaaaccacttaaatctctttcagaaatgttaaagggt
aaacaaggtcgttttcgccaaaacttgctcggtaaacgtgttgattactccggccgctca
gtcattgtcgttggcccagaacttagtttgaatcagtgcggtattcccaaagacatggct
cttgaaatgttcaagccctttgttatgagagagcttatcgccaaaggtctagctcccaat
gttaaatctgctaaaaacttaatcgaacaccgcattcctgaggtctatgacatcttggag
gaaatcaccaaaaatcatcctgtgttactaaaccgtgctccaactctccacaagctttcc
attctcgcctttaatccggtccttattgaaggctctgctattcgccttcatcccgcggtt
accgacggttttaacgctgactttgatggcgaccaaatggctgttcacgtacctctaact
aaaaaagcccaagaagaagccagaaaccaaatgcttccacaacacaatctactcaaacct
tccgttggtaaacctgttgctatccctgccaaaaaagagatggccattggtgtttattac
ctcacttctatcgaggaaaaccaagaagccaatcaagacaccatctatgctgaccccaaa
gaagtcttgcttgcctacaatatcggacttcttcatctccgccaacctgttcaattgcgt
ctcaatggcaaagtaattattaccacccctggtcgaattattttcaatgaggtggtacct
caagagttcggatacatcaatgaaactatcactagctctactattaaatcactctttgcc
aggtcaattaaagaacttggatccgatcgagttgtcaagctaattgatgacatcaaagat
ataggcttcgaggcaggcaccatctcaggtctctcattcgccatctccgataacgaacta
tatcagaagaaacaagccgttattcagcaaggtaatcaacaagttgcccaggttgaacaa
aactatgctcagggactaatcaccgaccaggaacgacgtcgtctcagcaatgaagtctgg
atgcgcatcaccgatgagctctctgacctcacctgggaaaccttccgacctggcaatcct
attcgtctcatcattgagaccggaatgggacgtattaccagagacactatcaaacaactt
tccgccatgcgcggcttagttactgaccccttaggtaatattgtcgaattacctatcaaa
ggtaattatcgcgagggtctttctatctttgaatatgtcaactccatcagaggttctaga
aaaggccttatcgacaccgctcttaaaacagccgacgctggttatcttactcgccgactc
gtcgacgcctctcacgacgccattattagagaacaagactgtggcaccaaagatggaatc
accatctctacacaagggccacgtggtgataaatttgccgatcgacttgtaggccgcttc
actttaaagaaaatccttcaccccaaaaccaagaaacaaatcctctccgccaatcaaatt
attgatgatgaagcagtcaaacaaattattgaagcaaatataaccgaagttgaagttcgc
tctcctctaacctgcgaatcacgtttcggtgtctgtgttcattgctatggtctaaacttt
gccaatcttgaaatcactcaaattggtgatcctgttggaattctagctgctcaatccatc
ggcgaacctggcactcaacttaccatgagaaccaaacacacctctggctcggtcggtcta
gacgtgacccaaggtttaccccgtgttaccgaacttctcgaggtcagaacacctaaaaac
ctctcacccattgccgaagttgctggtaaagccaaaattcttgagactgactctggctac
cgtattactattactcctaccattggtggtaaggatcaacgccgcgagtatcttgtaccc
ctcacctcagttcttaatattgaagatggtcagctcgtgccagccggtcacccactcgcc
tcaggcaacctagacgttaaacaagttcttaaggttaaaggtctccgtgccgctcaagaa
tatctcgttaatgaagctcagcgagtctatgaatctcaaggtattcctatcaaggacaaa
cactttgaggttattgtcaagaaaatgtcggacaaggttaaaatcgaaaccccaggtgat
acggatctactgcccggacaggttgttagccgaggtcgctttgacgctatcaatgaaagt
gtcatcgccgaaggtggccagccagccacagcaggtgttctaatcttaggtctaattcaa
tcctccctttacaccgaatcatggctatcatccgcttccttccaagacacaaccaaggtt
cttactcgtgccgctatcgaaggggacactgatccactcctcggtatgaaagaaaacgtt
atcattggtcgtcttattcccaccaatgccgaacgtgccgaaattaaagacggtttgctc
gttaaccaataa |
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