Corynebacterium aquatimens: CAQUA_04235
Help
Entry
CAQUA_04235 CDS
T09232
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAQUA_04235 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caqm03400
]
CAQUA_04235 (fpg1)
Enzymes [BR:
caqm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CAQUA_04235 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAQUA_04235 (fpg1)
DNA repair and recombination proteins [BR:
caqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAQUA_04235 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WJY65560
LinkDB
All DBs
Position
919066..920028
Genome browser
AA seq
320 aa
AA seq
DB search
MPELPEVEVVRRGLDSHVTGATFTRVEALHPRAVRGNDVDLADVLPGRTITGTGRRGKFL
WLLLNDEGLERSYERPNESQDERPNEGQDERPNENRAGHGLLVHLRMSGQMLVGPIGGVT
GLHVRIRAEMISSTGEPFELVFVDQRTFGSWQYVPLIAEEGQLVPATIGHIAPDPFESTF
DPVATARAIRTKNSAIKTVLLNQGVVSGIGSIYADEALWAAGIKPTRKARTLRQRDAVLL
LSESRDVMARALEQGGTSFDSLYVNVNGASGYFSRSLNAYGQAGKPCARCGTAIARTVVN
GRSSYYCPVCQAGSVSQQRR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaagtcgaggtcgtccgccgcggccttgacagccacgtcaccggc
gcaacgttcacccgcgtcgaagccctccacccgcgcgccgtccgcggcaacgacgtcgac
ctcgccgacgtccttcccggccgcaccatcaccggcaccgggaggcgcgggaagttcctg
tggcttttgcttaacgacgaagggttggagcgctcttacgagcgccccaacgagagccaa
gacgagcgccccaacgagggccaagacgagcgccccaacgagaaccgggccgggcacggc
ctgctcgtgcaccttcggatgagcgggcagatgctcgttggcccaatcgggggagtaacg
ggcctgcacgtgcgcatccgtgcggagatgatcagtagtacaggcgaaccctttgagctt
gtgtttgtggatcaacgcacgttcggctcatggcagtacgtaccgctcattgcggaggag
ggtcagctggttccggcgacgatcgggcacatcgcccccgacccgtttgagagtactttt
gaccccgttgccacggcgcgagcgatccgcacgaagaattccgctatcaagacggtgttg
ctcaaccaaggggtggtcagcggcatcggctcgatttacgcggatgaggccctgtgggcc
gccggcatcaaaccaacccgcaaagcacgcacgttgcggcagcgtgatgccgtgctgctc
ttaagcgaatcccgcgacgtgatggcgcgcgcccttgagcaaggcgggaccagttttgat
tcgctgtacgtcaacgtcaatggggcgagtggatatttttcgcgttcattgaacgcctat
ggccaggcgggaaaaccctgcgcacggtgcggaacagcgattgcgcggacggtggtcaac
gggcgttcgagctactactgcccggtatgccaggcgggatcggtgtcacagcagcgacgc
taa
DBGET
integrated database retrieval system
