Corynebacterium aquatimens: CAQUA_04930
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Entry
CAQUA_04930 CDS
T09232
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
caqm
Corynebacterium aquatimens
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caqm03021
]
CAQUA_04930 (sigB)
Transcription machinery [BR:
caqm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAQUA_04930 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
Dark_CARD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WJY65699
LinkDB
All DBs
Position
complement(1075813..1076817)
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AA seq
334 aa
AA seq
DB search
MTQPDVNPVAGAEEAEEKVDPGSRRNQTNDNPSADLVRVYLNGIGKTALLNAEEEVELAQ
TIEVGLYAQHLLDDPDTHLTRAKKRDLKILAKQGRKARAHLLEANLRLVVSLAKRYTGRG
MPLLDLIQEGNLGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVE
QVNKLSRIRREMYQSLGREPTNEELAEESGIEESKIEMLLRQSRDPVSLDMPVGADEEAP
LGDFIEDAEAADAEDAVVSVLRHDDIHDIINGLEQREQDVIRLRYGLDDGVPRTLDQIGR
EFGLSRERVRQIEREVMSKLRVGERADRLRDYAM
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccggatgtgaatccagtggcaggcgctgaggaagccgaggaaaaagtagat
cctggctcacgccgcaatcagacgaatgacaacccgtccgcggacttggtccgtgtgtac
ctcaacggcatcggcaagaccgccctgctcaacgccgaggaagaggtagaactggcccaa
accattgaggtgggcctctacgcccaacacctgctggatgatccggacacgcacctgacc
cgcgcgaaaaagcgtgacctgaagatcttggccaagcaaggccgtaaagcacgcgcccac
ctgcttgaggcgaacctgcgcctggtggtttctttggccaagcgctacaccggccgcggc
atgccgctgctggacctcatccaggaagggaacctgggcctgatccgcgccatggagaag
ttcgattacgcaaagggctttaagttctccacctacgcaacctggtggatccgccaggca
atcacccgcggtatggccgaccagtcccgcacgatccgcctcccagtccacctcgtggag
caggtgaacaagctctcccgcatccgccgcgagatgtaccagtcccttggccgcgaaccc
acgaacgaggaactggccgaggaatccggcatcgaagagtccaagattgaaatgctcctg
cgccagtcccgcgacccagtgagcttggacatgccggtcggcgccgatgaggaggccccg
ctgggtgacttcatcgaagacgctgaggccgccgacgccgaggatgcagttgtctccgtc
ctgcgccacgatgacatccacgacatcatcaacggccttgagcaacgcgaacaggacgtg
atccgcctgcgctacggtctcgacgacggcgtgccgcgcacactcgaccagatcggacgc
gagttcggcctgtcccgcgagcgcgtccgccaaatcgaacgcgaagtgatgagcaaactg
cgcgtcggcgaacgcgcagaccgcctccgcgactacgcaatgtaa
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