Corynebacterium aquatimens: CAQUA_05015
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Entry
CAQUA_05015 CDS
T09232
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
caqm
Corynebacterium aquatimens
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caqm03016
]
CAQUA_05015 (rnd)
Enzymes [BR:
caqm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CAQUA_05015 (rnd)
Transfer RNA biogenesis [BR:
caqm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CAQUA_05015 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WJY65716
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Position
complement(1095341..1096567)
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AA seq
408 aa
AA seq
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MTAGGVHGVGVKYTYATTPDHYRAAAESLAAGRGPFAIDTERASSFRYDDRAFLVQIARR
DAGTFLIAPEHHRHDMREIFAPVVGGTDWILHAAPEDLPSLAELGLYPGTLFDTALAGRI
AGFDKPNLAAMVEEFCGVVLEKGHGREDWSLTPLPEDWLRYVAADVDYLCDLAEAQAEYL
DAAGKLDIAEAEFAHIISRNAAGDYVPEHSWRKLKGVSALKNPVSLALAQRMWEERDALA
AQRDIAPNRVLNGRVIIEVAKTRPRSARDLARIHGFPARRRGAVALWFGIISEVYEEGAP
RTLLNDEPARNHTQRLSDAPSKSVWKSRHPHEWDLLNQVRDGMIQLGEDASIAPEILVEP
AVLRAAVWELTQRSRTVRVDDAAHALLKFGARPWQAEAAAPVIATALA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgggggtgtgcacggcgtgggggttaagtacacgtatgccacaacgccggat
cactaccgcgcagcggctgaatctttagcggcaggacggggcccgttcgcgattgatacg
gaacgggcgtcctccttccggtacgacgaccgtgcgtttctagtccagatcgcgcgccgg
gacgcaggcacgttcctgattgcgccggagcaccaccgacacgacatgcgggagattttc
gcgccagtagtgggcggcacagactggatcttgcacgccgcgccggaagatctgccaagc
ctggcggagctggggctctacccgggcacgctctttgacacggcgctggccggacgcatc
gcgggctttgacaagccgaacctggctgcgatggtggaagaattttgcggcgttgttctg
gaaaaaggacacggccgggaggattggtcgctcactccactgccggaggactggctgcgc
tacgtcgcggcggacgttgactacctgtgtgacctcgccgaggcccaggcggagtacctc
gatgccgctggcaagctagacatcgccgaggcagaattcgcgcacataatctcacgcaat
gctgctggcgattacgtcccggagcactcgtggagaaaactcaagggcgtctcggcgttg
aagaacccggtgtcgctcgcgcttgcgcagcgaatgtgggaggaacgtgacgcgctcgcc
gcgcagcgcgacatcgccccgaatcgcgtccttaacggccgagtcatcatcgaggtagct
aaaacccggccgcggtccgcacgcgacctcgcgcgcattcacggcttcccagcccgccgt
cgcggcgccgtagcactgtggttcggaatcatcagcgaggtctacgaagagggcgcgccg
cgcacgttgcttaacgacgaaccggcgcgcaatcacacccagcgcctcagcgatgcgccc
agcaaatcggtgtggaaatcccgccacccgcacgaatgggacctgctgaaccaggtgcgc
gacgggatgatccaactcggcgaagacgcgtcgattgccccggaaatcctcgtggagcca
gcggtccttcgcgcggcggtgtgggaactcacgcagcgcagccgaactgtgcgcgttgat
gatgccgcgcacgcattgttgaagttcggcgcccgaccttggcaggcagaagcagccgcc
ccagtcattgccacggcgttggcgtag
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