Corynebacterium aquatimens: CAQUA_05820
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Entry
CAQUA_05820 CDS
T09232
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
caqm
Corynebacterium aquatimens
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caqm03000
]
CAQUA_05820 (gabR)
Transcription factors [BR:
caqm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CAQUA_05820 (gabR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_36
HTH_24
HTH_Crp_2
HTH_11
Fe_dep_repress
TrmB
Motif
Other DBs
NCBI-ProteinID:
WJY65871
LinkDB
All DBs
Position
complement(1262492..1263961)
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AA seq
489 aa
AA seq
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MLIDLDRSRPVSLPAQIAAAIRDAITSGTLAPGDAVPSTRELAGQLGVSRGSVITAYDQL
TSEGYLEASQGAPTRVHPSLPQQNTGSGTITATHEPPRTHALRRPGLPTISLKPSSGHAG
SVRPAAWRKAWREAAADPVPDSDAAGHPDLRAAIAEHLRTARGIAVTAEDVLVTGGSREG
LLLILLAYSRSRANSSANSSARSSFRPTATSLRVGVEDPGHPGLRRVIAAAGHEPVPCPI
DDSGVVVPGLPEDLDALLVTPAFQYPLGASMPAARRAELLSWAAATGTTIIEDDFNAELR
YRIAPQPPLAVALSPTTPAHPRVLTLGSFSTLLGRSLSVGYIVAPRGAAAELLPTRRIIG
IPVSAVAQLAVAHLLRDGHVRRNTKAVRNRLAARRSTIQADVLPALHARGITVTEMAETG
GVDLALSFPDAESRESFTAALADRGVECGRLESLWSGQTDGLIMSFAHVDDADFARAISH
VHAAASHHY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgctcatagacctcgaccgatcacgtccggtatccctccccgcccagatcgcggccgcg
attcgtgatgcgatcacctccggtaccctcgcgcctggcgacgcggtgccttctacgcgc
gagctcgcgggccagctcggggtctcgcgcgggagcgtaattaccgcctatgaccagctc
accagcgaggggtacctcgaagccagccagggcgcgccgacccgcgttcacccaagcctc
ccgcaacaaaacacgggctccggcaccatcaccgcgacccacgagcctccccgcacgcac
gctttacgacgaccgggtcttcccacaatctcgctgaaaccgtcctcggggcatgcggga
tcggtgcgtccggcggcgtggcgcaaggcgtggcgcgaggccgcggccgacccagtaccg
gatagcgatgctgcagggcacccggacctgcgcgccgcgatcgcggagcaccttcgcaca
gcgagggggatcgccgtgactgcggaagatgtgctggtcaccggcggttctcgagagggt
ctgctgctcatcctcctggcgtattccaggtcccgcgccaactccagcgccaactccagc
gccagatccagcttcagacctacagccacgtcgctgcgcgtgggtgtggaagaccccggc
cacccgggtctgcggagggtgatcgctgcagcgggccacgagcccgtgccgtgccccatc
gacgattccggcgtggtggtgcccgggctccccgaggatctcgacgcgctcctggtcacc
cccgcgttccagtaccccctgggggcatctatgcccgctgcccggcgcgcagagcttctc
agctgggccgccgcaaccggtacgaccatcattgaggacgatttcaacgcggagctgcgc
taccgtatcgcgccccagccgccattggcggttgcactatcgcccaccacacctgcccat
cccagggttctcaccctgggcagcttctccacgcttctggggcgctccctgtcggtcggc
tacatcgtcgcacctcgcggagcagcagcagaacttcttcccacccgcaggatcattggc
atccctgtatccgcggtcgctcagctcgctgtggcgcatttgcttcgcgacggccacgtg
cgccgcaacaccaaagccgtccgcaaccggctcgccgcgcgccggagcaccatccaggcc
gatgtcctgccggcacttcacgcgcgcggcatcactgtcacagagatggcggagaccggt
ggtgtggacctggcgctgtcattccccgatgccgaatcccgggaatccttcaccgccgct
ctcgcagatcgcggtgttgaatgcggacgtctcgagagcctttggtctggacagaccgac
ggcctcatcatgagcttcgcgcatgtcgatgacgcagacttcgcccgagcgatttcccac
gtccacgccgcggcgtcacaccactattga
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