Corynebacterium aquatimens: CAQUA_06300
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Entry
CAQUA_06300 CDS
T09232
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm03030
DNA replication
caqm03410
Base excision repair
caqm03420
Nucleotide excision repair
caqm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAQUA_06300 (polA)
03410 Base excision repair
CAQUA_06300 (polA)
03420 Nucleotide excision repair
CAQUA_06300 (polA)
03440 Homologous recombination
CAQUA_06300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caqm03032
]
CAQUA_06300 (polA)
03400 DNA repair and recombination proteins [BR:
caqm03400
]
CAQUA_06300 (polA)
Enzymes [BR:
caqm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAQUA_06300 (polA)
DNA replication proteins [BR:
caqm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAQUA_06300 (polA)
DNA repair and recombination proteins [BR:
caqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CAQUA_06300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAQUA_06300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
WJY65965
LinkDB
All DBs
Position
complement(1367637..1370366)
Genome browser
AA seq
909 aa
AA seq
DB search
MTKRLLLIDGHSMAFRAFYALPAENFSTSGGQHTNAVYGFLSMFANVVAEEQPTHLAVAF
DVGRKTFRTDMFPEYKAQREAAPEAFKGQVPIIQDVLGDLGVTTLSKENYEADDVLATLV
AEAKAGAASGDVGAASDGVGAASNDAAPWEVVIVTGDRDYIQLVDENTTVLYPTRGVSTL
TRFTPEEVQAKYGMSPAQYPDFAALRGDPSDNLPKIPGVGEKTAAKWIVEYGDLETLLSR
ADEIKGKTGDALRERVDQVRLNRELTQMVTDVDLPVGINDLELKAADVSEVAQAFDDLEF
GVNLRERVLAAVPTTGTMGDGASTEGGEDERELVVDDAPLHEWLEAREGQGLALYVLGTG
APFRGDASALAIVDKQWHGVSVELANLSPREDAALVRWIESDSPKYLHGAKATWHMLQGR
GLTLRGIAHDTMIAAYLLRPGQRTYELADVYQRHLHKQLASAGEQMSLLGDTSLADSAAA
ILELSAALAGELRAIDSYELYADLELPLVEILAGMEHAGIGVDIDVLEEQLRDFVDKVTQ
AEERARSLVDEPSLNLSSPKQLSTVLFDKLELPKTKKTKTGYSTAAKEIEALAAKNPHPF
LDELLAHREYQKMKSTLEGLIKTVQSDGRIHTTFNQTVASTGRLSSTEPNLQNIPVRTEA
GRKIRSAFVVGSGYECLLTADYSQIEMRVMAHLSEDAGLIEAYREGEDLHNFVGSRVFDV
PIDAVTPELRRRVKAMSYGLVYGLSAFGLSNQLSIPPGEAKVIMESYFQRFGGVKRYLDE
VVEQARRDGYTSTVFGRRRYLPELTSDNKVARENAERAALNAPIQGSAADIIKVAMIRVE
EALRSAPAERALQSRVLLQVHDELVVEVAPGELDTVREIVEREMDQAISLRVPLEVSAGT
GRNWDDAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacgcttgttgcttatcgacggccactcgatggcattccgggccttctacgcg
ttgccggcggagaatttctcaacctccgggggccagcacaccaacgcggtgtatgggttc
ctttcgatgtttgccaacgtcgtggccgaggagcagccgacgcacctggccgtggcgttt
gacgtgggacgcaagacgttccgcacggacatgttcccggagtacaaggcgcagcgcgag
gcggccccggaagcgttcaaaggccaggtgcccatcatccaggacgtcctgggggatttg
ggcgtgaccaccttgagcaaagagaactacgaggccgatgatgtgctggcgaccctcgtt
gcagaggctaaggccggtgcggcgtcgggtgatgtcggtgcggcgtcagatggtgtcggt
gcggcgtcgaatgacgccgcaccgtgggaggtcgtgatcgtcaccggggaccgggactac
atccagcttgtggatgagaacactacggtgctttatcccacgcgcggtgtgtccacgctg
acccggtttacgccggaggaggtccaggcgaagtacggcatgagccctgctcagtacccg
gattttgcggccctgcgtggggacccatcggataacttgcccaagattccgggcgtgggg
gagaagactgcggctaagtggatcgtggagtacggcgaccttgaaaccctgctatcccgc
gcggacgagattaagggaaagaccggtgacgccctgcgtgagcgcgtggaccaggttcgg
ctcaaccgcgagctcactcagatggtcactgacgtggacttgccggtcgggatcaacgac
ttggaattgaaggccgccgatgtcagcgaggttgcacaggcattcgacgatctggaattt
ggggtcaacctccgcgagcgtgtgctcgccgccgtccccaccaccggaacgatgggcgac
ggtgcttcaacagaaggcggggaggatgaacgcgagctcgtcgtcgatgacgccccgctg
cacgagtggttagaagccagggaggggcaaggtttggccctgtatgtgcttggcaccggt
gcgccgtttaggggggatgcgtcggcgcttgcgatcgtcgataagcaatggcacggcgtg
agcgttgagcttgcgaacttgagcccgcgggaggacgccgcgcttgtgcggtggattgaa
tcggattctccgaagtacctccatggggcgaaggctacgtggcacatgctgcaagggcgc
gggttgacgctgcgcggcattgcgcacgacacgatgattgccgcgtaccttttgcggccc
ggccagcggacctatgagctggccgatgtgtaccagcggcacctgcataagcagctggcg
tcggcgggcgagcagatgagtttgctgggggacacctccctggcggattcagcggccgcg
attttggagttgtcagcggcgttggcgggcgagttgcgcgcgattgattcctatgagctc
tacgcggatctggagcttccgctggtggaaatcctcgcaggaatggagcacgcgggtatc
ggtgtggacatcgatgtgctggaggaacaactgcgggacttcgtggacaaggtcacgcag
gcggaggaaagggcacgatcgcttgtcgacgaaccttcgctgaacctgtcctccccaaag
caattatcaacggtgctttttgacaagctggagctgcctaagacgaagaagaccaagacg
ggttactccacagctgcgaaggaaatcgaagcgctagctgcgaagaacccgcacccgttc
ctcgatgagctgctggcgcaccgcgagtatcagaagatgaagtccacgcttgagggactg
attaaaacagtgcaatctgacggtcggattcacacgacgtttaaccagaccgtggcatcg
actgggcggttgagttccaccgagccgaacctgcagaacatccccgtgcgtactgaggct
gggcggaagatccgctccgcgttcgtggtgggttctggctacgaatgcctgctgaccgcc
gactattcgcagattgaaatgcgcgtcatggcgcacttgagtgaggacgccgggttgatt
gaggcctaccgcgaaggcgaggatttgcacaacttcgtgggctcccgcgtctttgatgtc
ccgattgatgccgtgactcctgagctgcgacgccgcgtgaaagccatgtcctacggactg
gtctacggcttgtccgcgtttggcctgtccaaccagctgtccatcccgccgggcgaagcg
aaggtgatcatggaaagctacttccagcgcttcggcggtgtgaagcgatacctcgatgaa
gtagtcgagcaagctcgccgcgatggctacacttccaccgtcttcggccgccgccgctac
ctgccagaactgacctctgacaacaaggtcgcccgcgaaaacgctgagcgcgctgccctc
aacgctcccatccagggcagcgccgccgacatcatcaaggtggcaatgatccgcgtcgag
gaagctcttcgatccgctcccgccgagcgggcactccaatcccgcgttttgcttcaggtc
cacgacgaactcgtggtggaagtagcccccggcgagctcgataccgtccgcgaaatcgtc
gaacgcgaaatggaccaggccatcagcctgcgggtccccttagaagtctccgctggaacc
ggccgcaactgggacgacgccgcccactag
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