Corynebacterium aquatimens: CAQUA_06945
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Entry
CAQUA_06945 CDS
T09232
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAQUA_06945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caqm03021
]
CAQUA_06945
03019 Messenger RNA biogenesis [BR:
caqm03019
]
CAQUA_06945
Transcription machinery [BR:
caqm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CAQUA_06945
Messenger RNA biogenesis [BR:
caqm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAQUA_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WJY66090
LinkDB
All DBs
Position
complement(1506331..1508277)
Genome browser
AA seq
648 aa
AA seq
DB search
MTTTGTTASDLAALKLPELRKMAADQGLKGISTLRKGELITAITTGSVPKKARKAAEAAA
EGAENTATAAAAESATPEASESGDQAQRSTARRTRRHRSRSSEDMQENTSNDHGDNGEQD
RGGDKNDRGGQDRREEKNNRGEQDRREEKHDRRDDKNDRDGQDRREDKNDRSDSGERDGE
DRDEQRGNRNNRRDGGNNRDNNRDNNRDGEGGGRRGRRNRRNRRNRDNNRGDNGNGNGNG
GGNGNNRGDNQNQNFDPEELAEVAGIVDIVDNNAAFVRTTGYRSNSADVFINNQLVRRCG
LRSGDAVIGQVRENGQGHTHGSGRNRHRYNQLVRVDSVNGMDVEAAKQRPEFHKLTPLYP
NQRLRLETEPNILTTRVIDLVMPIGKGQRALIVSPPKAGKTTILQNIANAIAHNNPECYL
MVVLVDERPEEVTDMQRSVAGEVIASTFDRPPSEHTAVAELAIERAKRLVEMGQDVVVLL
DSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEDGGSLTIIATAMVETG
SAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLAPEEARVMHKLR
RILSALDPQQAIDLLIKQLKKTKSNGEFLVGVVNSAPMAADVEPEEFE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacaacgggtactacggcgagcgacctcgccgcgctcaaacttcctgagctgcgc
aaaatggcggccgaccaagggctgaaggggatttccacgctgcgcaaaggcgagctgatc
accgccatcaccaccggctccgttccgaagaaggcgcgcaaagccgctgaagcagccgcc
gagggggcagaaaacaccgcaaccgccgcagcagcagaatctgcaactcctgaggcttca
gagtccggggatcaggcacagcgctccaccgcccgccgcacgcgccgtcaccgctcccgc
agctccgaggacatgcaggagaacacctcgaacgaccacggtgacaacggcgagcaggat
cgcggcggcgacaagaacgaccgcggcgggcaagaccgccgcgaggagaagaacaatcgc
ggcgagcaggaccgccgcgaagagaagcacgaccgtcgcgacgacaagaacgaccgcgac
gggcaggaccgccgcgaggacaagaacgaccgcagtgatagcggtgagcgtgacggcgag
gaccgcgacgagcagcgggggaaccggaacaaccgtcgtgacggtggaaacaaccgggac
aataaccgggacaacaaccgggacggtgaaggcgggggtcgccgtgggcgtcgtaaccgt
aggaaccgtcgaaaccgggacaacaaccggggcgataacggcaacggcaatggcaatggc
ggtggcaatggcaacaaccgcggtgacaaccagaaccagaacttcgacccggaggagctg
gcggaggtcgcgggcatcgtcgacattgtggataacaacgccgcgttcgtgcgtacgacg
ggctaccgttccaactccgcggacgtgttcattaacaaccagctggtgcgccgctgcggg
ctgcgctccggtgatgcggtgatcggccaggtgcgtgaaaacggccagggccacacgcac
ggttcgggccgcaaccgccaccgctacaaccagctggtgcgcgtggattccgtgaacggg
atggacgtggaggctgccaagcagcgccctgagttccacaagctcacgccgctgtacccg
aaccagcgtctgcgcctggagacggagccgaacattttgaccacgcgcgtgatcgacttg
gtcatgccgattggtaagggccagcgcgcgctgatcgtgtccccgccgaaggctggtaag
accacgattttgcagaacatcgccaacgcgatcgcgcacaataacccggagtgctacctg
atggtcgtgcttgtcgacgaacgccccgaggaagtcacggacatgcagcgcagcgtcgcc
ggagaggtcattgcctcaacctttgaccgcccgccgagcgagcacaccgctgtggcggag
ctggcgattgagcgcgcgaagcgcctggtggagatgggccaagacgtcgtggtcctgctc
gactcgattacccgcctggggcgtgcgtacaacaactcctcgccggcgtcgggacgaatc
ctgtccggtggtgtggactccaacgcgctctacccgccgaagcgtttcctgggcgccgcc
cgcaacatcgaggacggcgggtcgctcaccatcatcgccaccgcaatggtggaaactggc
tcggccggtgacacggtgatcttcgaggaattcaagggcaccggtaacgcggaactcaag
ctggaccgcaagatcgcggaacgccgcgtcttcccggcggtggacgtcaacccgtccggc
acacgcaaggacgagctgctcctcgccccggaggaagcccgcgttatgcacaagctgcgc
cgcatcctgtccgcgcttgacccgcagcaggcgattgacctgctgatcaagcagctgaag
aagaccaagtccaacggtgagttcttggtcggtgtggtcaactcggcgccgatggccgcg
gacgttgagccggaggagttcgagtaa
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