Corynebacterium aquatimens: CAQUA_07485
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Entry
CAQUA_07485 CDS
T09232
Symbol
ykoV
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CAQUA_07485 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caqm03400
]
CAQUA_07485 (ykoV)
DNA repair and recombination proteins [BR:
caqm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CAQUA_07485 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
DUF7565
Desulfoferrod_N
Serglycin
Motif
Other DBs
NCBI-ProteinID:
WJY66193
LinkDB
All DBs
Position
1637118..1637978
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AA seq
286 aa
AA seq
DB search
MRAIWSGAITFGLVNVPVKAYGATTNHDISFHQVHAKDNGRIHYERRCEVCGEIVEYADI
AKAFEEDGDTVVLSDDDFDSLPEADNDEIEVLQFVPSDQVDPVMLDKSYYLEPQGKTPKS
YLLLRQTLEDTDRTAIVRFALRQKTRLGALRVRGKVLILQSMLWADEIRDIDYSEGFKGT
KSRAKIGDKELKLSAALVEQYSSDFTPEEYEDDYQVELRKLIDAKFEHGDTIDTEATFGR
SGSGSESGSDFGSSSDSDSSGDSDADVVDLMAALQASLEKKRGKSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaatctggagtggagcgatcacctttggccttgtcaacgtgcccgtcaaagcg
tacggcgcgaccactaaccacgacatttccttccatcaggtgcacgcgaaagacaacggg
cggatccactacgaacggcgctgcgaagtgtgcggcgagatcgtcgagtacgccgacatc
gcgaaagcctttgaggaagacggcgacaccgtcgtgcttagcgacgatgactttgactcc
ctccccgaagccgacaacgacgaaatcgaagtcctgcagttcgtgcccagcgaccaagtc
gacccggtcatgctggacaaaagctactacctcgaaccgcaaggcaaaacgccgaagagc
tacctgcttctgcgacaaacgcttgaggacaccgaccgcaccgcgatcgtacgctttgcc
ctacggcagaaaacccggctgggcgcgctgcgcgtccgcggcaaagtcctcatacttcag
tcgatgctgtgggccgacgaaatccgcgacatcgactattccgaaggcttcaaaggcacc
aaatcgcgcgcgaaaatcggcgataaggagctgaaactgtccgccgcattggtcgagcag
tactcctccgacttcacgccagaagagtacgaggacgactaccaagtcgagctacgcaag
cttatcgacgccaaattcgaacacggcgacaccatcgacaccgaagcgacctttggacgt
tccggttctggttctgagtctggctctgactttggctcttccagcgattccgactcgtcc
ggtgattccgacgcggacgtcgtcgatctcatggccgcacttcaggcgtcgctggagaag
aagcgcggcaagagcgcctag
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