Corynebacterium aquatimens: CAQUA_09005
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Entry
CAQUA_09005 CDS
T09232
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caqm
Corynebacterium aquatimens
Pathway
caqm03420
Nucleotide excision repair
caqm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caqm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAQUA_09005 (uvrD2)
03430 Mismatch repair
CAQUA_09005 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caqm03400
]
CAQUA_09005 (uvrD2)
Enzymes [BR:
caqm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAQUA_09005 (uvrD2)
DNA repair and recombination proteins [BR:
caqm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAQUA_09005 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
CAQUA_09005 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJY66488
LinkDB
All DBs
Position
complement(1960521..1962569)
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AA seq
682 aa
AA seq
DB search
MVDLAQLDPDQQVAASAPRGPVCILAGAGTGKTRTITYRIAHLIDEGFVSPQRVLAVTFT
SRAAGEMRDRLRVMGISGVQARTFHAAALRQLRYFWPQIAGDLPWQLIDNKFPLVGRAAR
AVGMESHKDMVRDLLGEIEWAKASLISPSAYVQRVEESPRTPPADAEKVAAVYQRYEDSK
TSPDGMLLDFDDLLLHVAGALENAPAVAEEFRAQYQTFVVDEYQDVTPLQQRVLDGWLGG
RDDLTVVGDANQTIYSFTGASPDYLLNFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGK
ATGRVAGTRLELQGMRAPGPEPTFAAYDDEPTEAREVARAISTLIAQGVPPREIAVLYRI
NAQSVAFEQALSDAGIVYQVRGGEGFFTRPEVREAISALVKAARRTDLPDDPVAIAKAAL
APLGLSATEPEGAQARERWQGLNALVGLITDIIATQEADSLEGVLRSLRTRAESKQPPSV
DGVTLASLHAAKGLEWDAVFLVGLVEKTLPISHAIKAGEEQIEEERRLFYVGITRAREHL
QLSWSFARQEGGRASRERSRFMDGIAPQLEIEEAPSRLTRSRLCRVCNGVLTAPADKSLG
RHRDCEPTYNEAAFTALKQWRLDTSRREQRPAFMVFTDATLLAVVESMPSSAGELLDISG
IGPSKLELYGEEVLAVLAPFRE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacctagcgcagcttgatcctgatcagcaggttgccgcatccgctccgcggggg
ccggtatgcattctggccggcgctggtacgggtaaaacccgaacgattacctaccgcatc
gcgcacttgatcgatgagggctttgtttccccgcagagggttctggccgtcacgttcacg
tcgcgtgccgccggggaaatgcgtgatcggcttcgcgtaatgggcatctcgggtgtccag
gcgcgcacgttccacgcggccgcgctgcgccaactccgctacttctggccgcaaatcgcg
ggtgatctcccgtggcagctgattgacaacaagtttccgctcgtcggacgcgccgcgcgg
gcagtgggtatggaatcccacaaggacatggttagggacctgctgggggagattgagtgg
gcgaaagcctcgctgatttccccttcggcgtacgtgcaacgggttgaggagagcccgcgt
acaccgcccgcggatgcggagaaagtggcggctgtctaccagcggtatgaagactcgaag
acaagccctgacgggatgttgttggatttcgatgatctgctgttgcacgttgccggcgcg
ttggaaaacgcccctgccgtagccgaggaattccgcgcgcagtaccaaacgtttgtggtg
gatgaataccaagacgtcacgccgttgcagcaaagggtgctggatgggtggttaggtggt
cgcgatgatctcaccgttgtgggggacgcgaaccagaccatttattcgtttacgggggca
agccccgactatctgctgaacttctcccggaagtacccgcacgcaacggtggtgaaactg
caaagggactaccgttccacaccgcaggtcacggatctggcaaacacagtgatcggcaaa
gcgactgggcgcgtagcgggaacccgattggagctgcagggcatgcgcgccccggggccg
gagccaacgttcgcggcctacgatgatgaaccgacggaggcgcgcgaggtagcgcgcgcg
atctccacgttgattgcacagggagttccgccgcgggagatcgcggttttgtaccgcata
aacgcacagtcagttgcgtttgagcaagcattgtcggacgccgggatcgtgtaccaagtg
cgcggtggtgaaggattcttcactcgccccgaggtgcgtgaagcaatctccgcgctggtg
aaagccgcgcggcgaacagacttgcccgatgacccggtagcaatcgcaaaggccgcgctt
gccccgctgggcttgagcgccactgaacccgaaggtgcgcaagcccgtgagcgttggcaa
gggctcaacgcactggttggcctgatcacggacatcatcgccacgcaggaggccgacagc
ctcgaaggggttctgcgttccctgcgcacccgcgctgaatccaagcagccgccgtctgtt
gacggcgtgacgctggccagtctgcatgccgcgaaggggttggaatgggatgccgttttc
ctcgttggcttggtggaaaaaactttgccgatctcccacgcgattaaggcgggggaggaa
cagattgaagaggaacggcggctgttctacgtaggcatcacgcgtgcgcgtgagcacctt
caactgtcgtggtcctttgcccgtcaagagggcggccgtgcttcgcgggaacgttcccgc
ttcatggacggaatcgccccgcagctggagattgaagaggcgccgtcgaggctgacgcgc
agccggctatgccgcgtttgcaacggtgttctgacggcgccagcggacaaatccctcggc
cgccaccgcgactgtgaacccacctacaacgaagctgcctttactgcgttgaagcagtgg
cggttggatacgtcgcggcgtgagcagcgccccgcgttcatggtgttcaccgacgcaacg
ttgttggcggttgtcgagtcaatgccgtcttcagcaggggaattgctggatatttccgga
atcggaccttccaaacttgagctttatggcgaggaagttctggcggttctggcgccgttc
cgggagtga
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