Corynebacterium aquatimens: CAQUA_11095
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Entry
CAQUA_11095 CDS
T09232
Name
(GenBank) Collagen triple helix repeat (20 copies)
Organism
caqm
Corynebacterium aquatimens
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
FG-GAP
FG-GAP_3
Rick_17kDa_Anti
TcdB_toxin_midN
Gly-zipper_OmpA
Motif
Other DBs
NCBI-ProteinID:
WJY66902
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Position
complement(2473240..2475351)
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AA seq
703 aa
AA seq
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MAPTGCNLLGDGRPELFVQDWMWQREGKRLGAGYGVTWENFKQAGDGSKPIDDEDLGVVR
LEQSTQYQSSLMGFSVACLGDTNGNGYDDVVFSDYINSVAPVVFGDKNLDTTSLQFMGTK
GYFIKGAPPRFSNGVNSVGDVDGDGLNDIAIMSNHSKIEVFKGVDDIATYDASSDKSRLL
MTVTNGTGKIQEFKDIGDINGDGNEDYAASYYAAKSPEAKDSANGMVWVIFGTGKPQNLD
LSKPLGEKGFVISGPLEGRDRLGMSTVGAGDLNNDGFDDLLIGADSLRNSGAAVVVWGGK
STEDVVTDFHNETNRGAYDSNGKSRGIALVAPQNSSGTGFSVAVSHPTRGDSSAASTLVI
GSWSADGRAGEKAAGQVHLVSANALTSASTGVISMESLPASQHATVYGDRAGQRAGRSVS
APGDMNGDGNPDIAFGSDGVQSTDRKPSVTLATMPAQRAKAPVVPVIGSGGTWWVNGTDT
GVVAAGSKGESAYELWLKEPGNAEKSMQEYLASLQGEEGKNGADGKDGADGKNGADGKNG
ADGKNGEPGKDGADGNTPFVGDNGNWWIGSKDTGVKANGSQGAPGQPGKDGADGKDGEPG
KDGADGKDGEPGKDGADGKDGADGKDGADGKDGEPGKDGEPGKDGADGKNSSSTVGTVIG
AVIGALLGTIGGVLAIAGVMNWRFPRETHEFVEAVRAVLEGRR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaccggatgcaacctgctcggcgacggccgacccgaactattcgtccaagat
tggatgtggcagcgcgaaggaaagcgactcggtgccgggtacggggttacctgggaaaac
ttcaagcaggcgggtgacggttccaaaccgattgatgatgaagacttgggagttgtgcgc
ctcgagcagtcgacccagtatcagtcctccctaatgggtttcagtgttgcctgcctcggg
gatacgaacggaaatggttacgacgatgtagtcttttccgactacatcaactccgtagct
ccagtcgtcttcggcgataagaatcttgatacgacctcgttgcaattcatggggacaaag
ggctacttcatcaagggggctccgccgcgcttctccaatggcgtgaacagcgtaggggat
gtcgacggcgatggtcttaatgacatcgcgatcatgtcgaaccattcgaagatcgaggtt
tttaagggtgttgacgacatcgcaacgtacgatgcctcttcagacaaaagccgtctcctc
atgactgtcactaatgggaccgggaagatacaggaattcaaggacatcggtgacataaat
ggagacggaaatgaggattacgctgcgagttactacgcagccaaatcgcctgaagccaaa
gattccgcgaacgggatggtctgggtcattttcggtaccggaaagcctcagaaccttgat
ctctccaagccgctaggagaaaaaggtttcgtgatctcaggccctcttgagggcagagac
cgccttgggatgtccacggtcggagctggggacctaaacaatgatgggtttgatgatttg
ttgatcggagcggattcgctccgaaactccggggctgccgtagttgtgtggggcgggaag
tccactgaagatgtggtaacggacttccacaacgaaaccaatcgcggggcttatgacagt
aatggaaaatcgagagggatcgcgctcgttgcgccgcagaatagtagcggaactgggttt
agcgtggcggtgtcccacccgacgaggggtgattcaagtgccgcatctacgctggtaatc
ggatcgtggagcgctgatggacgtgcgggagagaaggccgccgggcaggtccacttggtc
tcggccaacgcactgacttccgcatccacgggtgtcatttcaatggaatcactgcctgca
tcccagcacgccacggtgtacggtgaccgcgcagggcaacgggctggtaggtctgtgtcc
gcgccaggagacatgaatggagacggcaacccggacattgcgttcggctccgacggagtg
cagtcgacggacagaaagccatcggttacgttggccacgatgcccgcgcaacgtgcgaaa
gccccggtcgtaccggtgatcggttcaggcgggacctggtgggttaacggaaccgacacc
ggtgttgtcgccgcgggatcaaagggtgaatccgcctatgagctgtggctcaaggagccg
ggcaacgctgagaagagcatgcaggaatacctcgcttcgctccaaggtgaagaaggcaag
aacggcgctgacggcaaggacggcgctgacggcaagaacggcgctgacggcaagaacggc
gctgacggcaagaacggcgagccgggcaaggacggcgctgacggcaacacgccgttcgta
ggtgacaacgggaactggtggatcgggtccaaggacaccggtgtgaaagcgaacggttcg
cagggagcaccgggacagcccggtaaggacggcgcggacggtaaggacggcgagccgggc
aaggacggcgcggacggtaaggacggcgagccgggcaaggacggcgcggacggtaaggac
ggcgcggacggtaaggacggcgcggacggtaaggacggcgagccgggtaaggacggcgag
ccgggcaaggacggcgcggacggtaagaacagttcgtcgacggttggaaccgtgattggc
gcggtcatcggtgctcttctcgggactatcggtggggtactcgccattgcgggcgttatg
aactggcgtttcccgagggaaacgcatgaatttgtagaagcagtgcgcgcggtactggaa
ggacgtcgataa
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