Comamonas aquatica: KAQ61_00075
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Entry
KAQ61_00075 CDS
T07338
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
caqt
Comamonas aquatica
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caqt03009
]
KAQ61_00075 (dbpA)
Enzymes [BR:
caqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KAQ61_00075 (dbpA)
Ribosome biogenesis [BR:
caqt03009
]
Prokaryotic type
rRNA helicases
KAQ61_00075 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
NXPE4_C
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTX20951
LinkDB
All DBs
Position
16726..18135
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AA seq
469 aa
AA seq
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MTTSPSAAGAAASTAFSSLSLHPATLQNLQQLGYEQMTPIQAASLPLTLRGQDLIAQAST
GSGKTAAFGLPLLERLNQRWFAVQGLVLCPTRELADQVATEIRRLARAQENIKVVTVYGG
VPSRNQIASLENGAHIVVGTPGRVMDLIERGALDISKLQTLVLDEADRMLDMGFYADIVT
VVEQCPAQRQTLLFSATYPEGIAQLAQRFMREPQMVQVAAQHSAHKIAQRWYEVPARHKL
DVVVQMLAHFRPESTIAFCNTKQQCREAVTALQAQGISALALFGELEQRERDEVLVQFAN
RSCSVLVATDVAARGLDIANLSAVINIDVTPDPEVHIHRIGRTGRGDAEGLALHLVDMEE
MVHVAKIEQLQGRASEWFDVAELTPAPGGALLPPMMTIQLIGGRKEKIRAGDVMGAMCAD
FGYTREQIGKISVNDFSTYVAVDRRIAAEACAKLNNGRVKGKSVRARVL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcgcccagcgccgccggcgcagccgcatccacggcgttctcttccctgtcg
ctccaccccgccaccctgcagaacctgcagcagctgggctatgaacagatgacgcccatc
caggccgccagcctgccgctgacgctgcgcgggcaggacctgatcgcccaggccagcacc
ggcagcggcaagaccgccgccttcggcctgcccctgctggagcgcctgaaccagcgctgg
ttcgccgtgcagggcctggtgctgtgtcccacgcgcgagctggccgaccaggtggccacc
gaaatccgccgcctggcgcgcgcccaggaaaacatcaaggtcgtcaccgtctatggcggc
gtgccctcgcgcaaccagatcgccagcttggagaacggcgcccacatcgtcgtcggcacg
cccggccgcgtgatggacctgatcgagcgcggcgcgctggacatctccaagctgcagacc
ctggtgctggacgaagccgatcgcatgctggacatgggcttttacgccgacatcgtcacc
gtggtcgagcaatgccccgcgcagcgccagaccctgctgttctcggccacctaccccgaa
ggcattgcccagctggcgcagcgcttcatgcgcgaaccccagatggtccaggtcgccgcc
cagcacagcgcgcacaagatcgcccagcgctggtacgaagtacccgcccggcacaagctc
gacgtggtcgtgcagatgctggcgcacttccgccccgaatccaccatcgccttctgcaac
accaagcagcagtgccgcgaagccgtcaccgccctgcaggcccagggcatcagcgccctg
gccctgttcggcgagctggaacagcgcgagcgcgacgaggtgctggtgcagtttgccaac
cgcagctgcagcgtgctggtcgccaccgacgtggccgcgcgcggcctggacatcgccaac
ctgtcggccgtgatcaacatcgacgtcacgcccgaccccgaggtccacatccaccgcatc
ggccgcaccggccgcggcgatgccgagggcctggccctgcacctggtggacatggaagag
atggtgcacgtcgccaagatcgaacagctgcagggccgtgcctcggaatggttcgacgtg
gccgagctgacgcccgcccccggcggcgccctgctgccgccgatgatgaccatccagctc
atcggcgggcgcaaggaaaagatccgcgccggcgacgtgatgggcgccatgtgcgccgac
ttcggctacacgcgcgagcagatcggcaagatcagcgtgaacgacttctccacctatgtg
gcggtggaccggcgcattgcggcggaggcctgcgccaagctgaacaatggccgtgtgaag
ggcaagagcgtgagagcgcgtgtgctgtaa
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