Comamonas aquatica: KAQ61_01010
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Entry
KAQ61_01010 CDS
T07338
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caqt
Comamonas aquatica
Pathway
caqt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KAQ61_01010 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caqt03400
]
KAQ61_01010 (mutM)
Enzymes [BR:
caqt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KAQ61_01010 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KAQ61_01010 (mutM)
DNA repair and recombination proteins [BR:
caqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KAQ61_01010 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
RNHCP
HscB_4_cys
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
QTX21123
LinkDB
All DBs
Position
219625..220446
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AA seq
273 aa
AA seq
DB search
MPELPEVEVTRRSFASQIAGAQVLSVTLGKPLRWPLGRAPSSLVGARVQQVRRRGKYLLI
DLDRGMLMVHLGMSGSLRFATQLPAALGPHEHFDMQTDRGTLRLHDPRRFGAVIATDGDD
DPVARKLLDGLGMEPLDAHHFRWESFRDGLARSRTPIKPLLLGGKLVVGVGNIYASEVLF
ASRIAPTTPAQAISAVKARRLFQAIRDILALAVERGGTTLRDFSNADGLPGHFQLQAKVY
GREGQPCVQCGRPIALLRQGQRSTFYCPHCQKS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaggttgaagtcacgcgccgcagcttcgcgtcgcaaatcgccggt
gcccaggtgctgtcggtgaccctgggcaaacccctgcgctggccgctggggcgtgcaccg
tccagcctggtgggggcccgtgtgcagcaggtgcgccggcgcggcaagtatctgttgatc
gatctggaccgcggcatgctgatggtgcacctgggcatgtccggcagcctgcggttcgcc
acccagctgcccgccgcactggggccgcacgagcacttcgacatgcaaaccgaccggggc
acgttacgcctgcacgatccgcggcgtttcggcgccgtgatcgccacggacggcgacgac
gatccggtggcgcgcaagctgctcgacgggctgggcatggagccgctggatgcgcaccac
ttccgctgggagtcgttccgggatgggctggcgcgcagccgcacgcccatcaagcccttg
ctgctggggggcaagctggtggtgggcgtgggcaatatctatgcctccgaggtgttgttt
gccagccggattgcacccaccacgccggcgcaggccattagcgccgtcaaggcccgccgt
ttgttccaggcgattcgtgacatcctggccctggcggtcgagcgcggcggcaccacgctg
cgtgatttctcgaacgcggatgggctgccgggacacttccagttgcaagccaaggtttat
ggccgggaaggccagccctgtgtgcagtgtggcaggccgattgccttgttgcgccaaggg
cagcgcagcacgttctattgcccgcactgccagaaatcctag
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