Comamonas aquatica: KAQ61_05790
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Entry
KAQ61_05790 CDS
T07338
Name
(GenBank) OprD family outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
caqt
Comamonas aquatica
Pathway
caqt01501
beta-Lactam resistance
caqt02020
Two-component system
Module
caqt_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KAQ61_05790
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KAQ61_05790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caqt02000
]
KAQ61_05790
01504 Antimicrobial resistance genes [BR:
caqt01504
]
KAQ61_05790
Transporters [BR:
caqt02000
]
Other transporters
Pores ion channels [TC:
1
]
KAQ61_05790
Antimicrobial resistance genes [BR:
caqt01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
KAQ61_05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QTX21962
LinkDB
All DBs
Position
complement(1213609..1214955)
Genome browser
AA seq
448 aa
AA seq
DB search
MPCKISPLSALSALGAALLCAAAANAQASAQDEAQGFVAGSRLGLLNRVVWEQLDYQKGS
SFRATNGLRGQTQAQESAYGLMLNYQSGYTRGLVGVGLDAHAYGALNLDTQADSARATPR
YVAKDGADIADRFGRAGAALKLRLASTELKLGEMRTKNPIFNSSDSRLLPETNRGWQLTS
TDLPGLSLQAGRFTRWSDRNARQNGGRLLANYAGSPGDAFSFLGGTWTTPVPHLSVSSYY
GRYAEHWNTWYLGSAYQLPLAEQRKLAFNLNLYRNTDTGQARAGHIDTTTWSLMGSYAFG
PHKLGLGYQKVQGDNPFDYVNRGSIWLDNAMQLSDFNGPREASWQLKYDVDLGPLLAPGL
SAGVAYTRGSGIDHRHLNSVYANYLGYSGSGGKHWERDLLLRYTVQQGMAKGMALQLRYS
VHRANRTQGEANIDQIRLLVEMPIQLLP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcaagatctcccccctttccgccctttccgccctgggcgccgccttgctgtgc
gccgccgccgccaacgcccaggccagtgcccaggacgaggcccagggctttgtcgccggc
agccgcctgggcctgctgaaccgcgtggtgtgggagcagctggactaccaaaaaggcagc
agcttccgcgccaccaacgggctgcgcggccagacccaggcccaggaatcggcctacggg
ctgatgctgaactaccaatcgggctacacgcgcggcctggtgggcgtcggcctggatgcc
cacgcctatggcgccctgaacctggacacccaggccgacagcgcccgtgccacgccgcgc
tatgtggccaaggacggtgcagacattgccgaccgctttggccgcgccggcgccgcgctg
aagctgcgcctggcctcgaccgagctgaagctgggcgagatgcgcaccaagaaccccatc
ttcaactcctccgacagccgcctgctgcccgagaccaaccgcggctggcagctcaccagc
accgacctgcccggcctgagcctgcaggccggccgcttcacgcgctggagcgaccgcaac
gcgcgccagaacgggggccggctgctggccaactatgccggcagccccggcgatgccttc
agcttcctgggcggcacctggaccacccccgtcccccacctgtccgtcagcagctactac
ggccgctatgccgagcactggaacacctggtacctgggtagtgcctaccagctgccactg
gccgagcagcgcaagctggcgttcaacctgaacctgtaccgcaacaccgataccggccag
gcgcgggccggccacatcgacaccaccacctggagcctgatgggcagctacgccttcggc
ccgcacaagctggggctgggctaccaaaaggtgcagggcgacaacccgtttgactatgtg
aaccgcggctccatctggctggacaacgccatgcagctgtccgacttcaacggcccgcgc
gaggcctcctggcagctcaagtacgacgtagacctgggccccctgctcgcccccgggctg
agcgcgggcgtggcctacacgcgcggctcgggcatcgaccaccgccacctcaacagcgtc
tacgccaactacctgggctacagcggcagcggcggcaagcactgggagcgcgacctgctg
ctgcgctacaccgtgcagcaaggcatggccaagggcatggcgctgcagttgcgctacagc
gtgcaccgcgccaaccggacgcagggcgaagccaacatcgatcagatccgcctgctggtg
gaaatgcccatccagctgctgccctga
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