Comamonas aquatica: KAQ61_07640
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Entry
KAQ61_07640 CDS
T07338
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caqt
Comamonas aquatica
Pathway
caqt03030
DNA replication
caqt03430
Mismatch repair
caqt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KAQ61_07640 (dnaE)
03430 Mismatch repair
KAQ61_07640 (dnaE)
03440 Homologous recombination
KAQ61_07640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caqt03032
]
KAQ61_07640 (dnaE)
03400 DNA repair and recombination proteins [BR:
caqt03400
]
KAQ61_07640 (dnaE)
Enzymes [BR:
caqt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KAQ61_07640 (dnaE)
DNA replication proteins [BR:
caqt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KAQ61_07640 (dnaE)
DNA repair and recombination proteins [BR:
caqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KAQ61_07640 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTX22291
LinkDB
All DBs
Position
complement(1617522..1621067)
Genome browser
AA seq
1181 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTCRINDVINAAAADSQPALAITDLNNLFGALKFYKAGRGKGVKP
ILGAELNMEGLAGGPTSRVLVLVQSQHGYHNLSEILARGWTGNVSKVQAQPFFKWEWLQE
LGEGLLLLSGANAGPIGQALLRGDTQGAANMALQLASMFPHRFYLELQRAGRSEDEKLVM
QTVQLAARLHLPVVATHPIQFYKPTDYESHETRVCISEGEVLGNPKRVRRFTREQYFKSS
ADMEQLFADIPSAIENTVEIARRCSVSLLLGKYFLPDFPTPNGMSITDYFRHASFEGLEE
RLVLLFPDAAVRNAKRPQYVERLEFELGIILKMGFPGYFLIVADFINWAKNNGCPVGPGR
GSGAGSLVAYVLQITDLDPIHYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKDRY
GRNAVSQIATFGTMAARAVIRDVGRAMDMSYTFCDGISKLIPNKPGLHVTLKYPPNPKKE
GDKYTYAIEAEPVLAQRIEQEEDVKNLIELAQKLEGMTRNIGMHAGGVVIAPGKLTDFCP
LYQQPGSDSAVAMFDKDDVEQIGLVKFDFLGLATLTILEIAREFIMKRHKGQEHFRFEEI
PLDDYPTYKLFQEGKTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDLIPSF
VARKHGREQIEYPHPLVEQVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKK
VEEMVKHRATFCEGAAKQGIDEHKAGEVFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKV
HYTAEFFCGNMTVEMDNTDKLKVLYEDALKMGMSFEMPDVNRGVYRFEPVTDQVIRYGLG
AIKGTGQQAIEAIIAAREGQGVGPDGHVKGPFKSLCDFCARVDRSKLNKRTLEALIKAGA
FDSIHLDRAALVASVDHAFEYANAQLANANQGGLFDMMGDDAQGSSTQEPALAEVLPWGV
KERLTQEKLAVGFYLSGHLFDEVEHEVRNFLRTPLSELGDSREPQLLAGIVSDLRVINGQ
RGKLCLFKLDDKSAVLEASVDEATLNAHSDLLKDDEFVVLSGRVQHDHFSGGLRIKAQNV
FSLADARCRFARYLQVDAAHKLPDVQRLLREFPAQREVTPEGELRRGLRVRLGVRCEADG
MAALAEVDLGEQHKFYPSDAALAAWRAEVGTASCQLVWRNA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacttgcgcctgcacaccgagttctccgtcgtcgatggaacttgtcgtatc
aatgacgttatcaacgctgcggcggcggacagccagcccgcgctggccattaccgatctg
aacaacctgttcggggcgctgaagttctacaaggccggcaggggcaagggcgtgaagccc
atcctgggcgcggagctcaacatggaagggctggcgggcgggcccaccagccgggtgctg
gtgctggtgcaaagccagcatggctaccacaacctgtcggaaatcctggcgcggggctgg
accggcaatgtctccaaggtccaggcgcagccgtttttcaaatgggagtggttgcaggaa
ctgggcgagggcctgctgctgctgtccggggcgaacgccgggccgatcggtcaggccttg
ctgcggggggacacccaaggcgcggcgaacatggcgctgcagctggcgagcatgttcccg
caccgcttttacctggagttgcagcgcgccgggcgcagcgaggacgaaaagctggtgatg
cagaccgtgcagctggcggcgcgcctgcacctgccggtggtggccacgcacccgatccag
ttctacaagccgacggattacgaatcccacgaaactcgggtgtgcatttccgaaggtgag
gtgctgggcaatcccaagcgggtgcgccggttcacgcgggagcagtatttcaagagcagc
gccgacatggagcagctgttcgccgacattccctcggccatcgagaacacggtggaaatc
gcccgccgctgcagcgtctccctgctgctgggcaagtatttcctgccggacttccccacg
ccgaacggcatgtcgatcacggactatttccgccatgcctcgttcgaggggctggaagag
cgcctggtgctgctgttccccgatgccgccgtgcgcaacgccaagcgcccgcagtacgtg
gaacgcctggagtttgagctgggcatcattttgaagatgggctttcccggctacttcctg
atcgtggcggacttcatcaactgggccaagaacaacggctgcccggtgggcccgggccgt
ggctcgggggcgggctcgctggtggcctatgtgctccagatcacggacctggatcccatc
cactacaacctgctgttcgaacgtttcctgaaccccgagcgggtttccatgcccgacttc
gacgtggacttctgccaggccaaccgcgaccgggtgatcgactacgtgaaggaccgctac
ggtcgcaatgcggtcagccagatcgcgaccttcggcaccatggccgcacgggcggtgatc
cgcgacgtgggccgggccatggacatgagctacaccttctgtgacggcatctccaagctg
atcccgaacaagccgggcttgcacgtcaccctgaagtacccgcccaatcccaagaaggag
ggcgacaagtacacctatgcgatcgaggcggagcccgtgctggcgcagcgcatcgagcag
gaggaagacgtcaagaacctgatcgagctggcgcaaaagctcgaaggcatgacccgcaac
atcggcatgcacgccgggggtgtggtgatcgcaccgggcaagctaacggatttttgcccc
ttgtaccagcagccgggcagcgattcggccgtggcgatgttcgacaaggacgacgtggag
cagattggcctggtgaagttcgacttcttgggcctggccacgctgaccatcctggagatc
gcgcgcgagttcatcatgaagcgccacaagggccaggagcacttccgcttcgaggaaatc
ccgctggacgactacccgacctacaagctgttccaggagggcaagaccgaggccgtgttc
cagtttgaatcgcgcggcatgcagggcatgttgcgcgatgccaagccttcgcgcctggaa
gacctgatcgcgctgaacgcgctgtaccgtcccggccccatggacctgatcccgtccttt
gtggcgcgcaagcacgggcgcgagcagatcgagtacccgcacccgctggtggagcaggtg
ctggccgaaacctacggcatcatggtctaccaagagcaggtgatgcagacggcccaggtg
ctgggcggttattcgctgggcggcgccgacttgctgcgccgggccatgggcaagaagaag
gtggaggaaatggtcaagcaccgtgccaccttctgcgagggcgcggccaagcagggcatc
gatgagcacaaggccggtgaagtgttcgacctgatggagaaattcgcgggttacggcttc
aacaagtcgcacgcggccgcctattcgctgctggcctaccacacggcttggctcaaggtg
cactacacggcggaatttttctgcgggaatatgaccgtggaaatggacaacaccgacaaa
ctcaaggtgctgtacgaagatgcgctgaagatgggcatgagcttcgagatgcccgacgtc
aaccgcggcgtgtaccgctttgagcccgtcacggaccaggtcatccgctatggcctgggt
gcgatcaagggcaccggccagcaggcgatcgaagccatcatcgccgcgcgcgaaggccag
ggtgtgggtccggacgggcatgtcaagggacccttcaagagcctgtgcgacttctgtgcg
cgcgtggaccgcagcaagctgaacaagcgcacgctggaggccctgatcaaggcaggggcc
ttcgacagcatccacctggaccgcgcggcgctggtggcctcggtcgaccatgcgttcgag
tacgcgaacgcccaactggcgaatgccaaccagggcggcctgttcgacatgatgggcgac
gatgcccagggctccagcacccaggagccggcactggccgaagtcctgccctggggcgtc
aaggagcgcctgacgcaggaaaagctggcggtgggtttttacctgtcgggccacctcttc
gacgaggtggagcacgaagtgcgcaacttcctgcgcaccccgttgagcgagctgggcgac
agccgcgagccgcagttgctggccggcatcgtgagtgatctgcgtgtgatcaacggccag
cgcggcaagctgtgcctgttcaagctggacgacaagagtgcggtgctggaggcctcggtg
gacgaggccacgctgaatgcccacagtgatctgctcaaggacgacgagttcgtggtgctc
agcggtcgcgtgcagcacgaccacttcagtggcggcttgcgcatcaaggcgcagaacgtg
ttcagcctggccgatgcgcgctgccgctttgcgcgctatctgcaggtggatgcggcccac
aagctgccggatgtgcagcgcctgctgcgggagttcccggcgcagcgcgaggtcacgcca
gagggcgaactgcggcgtggcctgcgcgtgcgcctgggcgtgcgctgcgaggccgatggc
atggcggccttggccgaagtcgatctgggcgagcagcacaagttctaccccagcgatgcg
gccctggcggcatggcgtgccgaagtcggcacggccagctgccaactggtgtggcgcaac
gcttga
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integrated database retrieval system
