Comamonas aquatica: KAQ61_08950
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Entry
KAQ61_08950 CDS
T07338
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caqt
Comamonas aquatica
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caqt03016
]
KAQ61_08950 (truB)
Enzymes [BR:
caqt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KAQ61_08950 (truB)
Transfer RNA biogenesis [BR:
caqt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KAQ61_08950 (truB)
Prokaryotic type
KAQ61_08950 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QTX22512
LinkDB
All DBs
Position
complement(1881014..1881979)
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AA seq
321 aa
AA seq
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MTATRTRVQRRPVHGVVLLDKPLGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYIAIARLGQTTTTADAEGEVLRERAVDLPAITPEVLAQVRARF
TGPIQQVPPMYSALKKDGKALYEYARAGIEIERPARDVTIHALDIVLCKDADGRDALQLT
VTCSKGTYIRTLAEDVGEALGCGAHLRSLRRTDTGGIGVDRCITLDALIAMPEAERMHVV
QPADCLLHAHTRITLDARESGRFLTGLRRRGDWPDAEAVAIYGDEPRALLGVGHITSGEL
IPDRLLSPLEIQQILEGTPRA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactgccactcgcacacgggtgcagcggcgccctgtgcacggggtggtgctgctcgac
aaaccgctgggcctttccagcaacgacgctttgcagaaggtgaagtggttgttgcgtgcc
gaaaaggccggccacactggaactttggaccccctggccaccggcgtgctgccgctgtgc
ttcggggcggccaccaaattcagccaactgcagctggacgcgcccaagacctatatcgcc
atcgcccgcctgggacagaccacgaccacggccgatgccgagggcgaggtgctgcgtgag
cgtgccgtggacctgcccgccatcacccccgaggtgctggcccaggtgcgcgcgcgcttc
accggacccatccagcaagtgccgcccatgtacagcgcactgaagaaggatggcaaggca
ctgtatgaatatgcgcgcgccggcattgaaatcgaacgccctgcacgcgacgtgaccatt
catgcactggacatcgttttgtgcaaggatgccgacggtcgggatgcgttgcaactgacc
gtgacctgcagcaaaggcacatacattcgtacgctggcagaggacgtgggcgaggcgctg
ggttgcggcgctcacctgcgttcgctgcgtcgtaccgatacgggcggcattggtgtcgat
cgttgcatcactttggatgccttgatcgccatgcccgaagcagagcgcatgcacgtggtg
cagccggcagattgcctgctgcatgcccacacccgcatcacgctcgatgcgcgcgaaagc
ggccggtttctgaccgggctgcgtcgccgtggtgattggcccgatgccgaggccgttgcc
atttacggagatgaaccgcgcgccttgctgggtgtggggcacatcacaagtggggagctg
atacccgatcgcctgctcagccccctagaaattcaacaaattttggaaggcacgccgcgc
gcataa
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