Comamonas aquatica: KAQ61_09820
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Entry
KAQ61_09820 CDS
T07338
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
caqt
Comamonas aquatica
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caqt03032
]
KAQ61_09820
03036 Chromosome and associated proteins [BR:
caqt03036
]
KAQ61_09820
03400 DNA repair and recombination proteins [BR:
caqt03400
]
KAQ61_09820
DNA replication proteins [BR:
caqt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KAQ61_09820
Chromosome and associated proteins [BR:
caqt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KAQ61_09820
DNA repair and recombination proteins [BR:
caqt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KAQ61_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
FIMAH
DUF2530
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
QTX22732
LinkDB
All DBs
Position
complement(2064776..2065048)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIEHIANNADISKAAAARALESTIDAVKKTLKKGGTVSLVGFGTFAVGKRAARTG
RNPRTGDTIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagactgaactgattgagcacattgctaataacgccgatatttccaaggctgcg
gctgcccgcgctctggaatccacaatcgacgcagtgaagaaaaccctgaagaagggtggc
acagtttccttggtgggttttggtactttcgccgttggcaagcgtgctgcacgtacaggc
cgcaatccccgtacgggcgatacaatcaagatcaaggccgccaaggtgcctaagttccgt
cccggcaaggccctcaaggacgctttgaactaa
DBGET
integrated database retrieval system
