Comamonas aquatica: KAQ61_11800
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Entry
KAQ61_11800 CDS
T07338
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
caqt
Comamonas aquatica
Pathway
caqt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KAQ61_11800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caqt03400
]
KAQ61_11800
DNA repair and recombination proteins [BR:
caqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KAQ61_11800
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KAQ61_11800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QTX19732
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Position
2495307..2497961
Genome browser
AA seq
884 aa
AA seq
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MPNNSFGESSCAAAASGLVQVRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTI
YAEAQRRYFESVAPYARRLIDQAGVPDVDAIDGLPPAVALQQQRGSSNARSSVGSVTTLS
SLVRMMYSRAGAYPAGQPMLYAEDFSPNTPQGACPTCYGLGHVYEVTEAIMVPDPSLSIR
ERAIASWPPAWQGQNLRDILVSMGYDVDRPWKDLPKKDRDWILFTEETPTVPVYAGFTPA
ETRAALKRKMEPSYMGTFTGARRYVLHTFANTQSALMRKRVSRFMEGKPCPTCHGKRLKP
EALSVTFAGVDIGAFMQMPLDQLAALLEPIAQGDFRAHAAGAATDKEATRRDRAERAASG
RAVHAVSPDVRRTSALSEEKRLAAQRLAGGVMARLRQLRGLGLGYLTLDRATPTLSAGEL
QRLRLATQLSSLLFGVVYVLDEPSAGLHPSDSQALYDALDRLRDAGNSVFVVEHDLDLMR
RAQWLVDVGPDAGERGGRVLYSGEPDGLRKIAESRTARYLFDEIPAPGSRAREATGWLEL
QDIHRHNLHGVNARIPLGVLTAVTGISGSGKSSLVAQALPELVLLHLGHEPEDDAAESAT
SEGPAVIEATGGRLAGDVDAIQRMVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPDA
RRRRYDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVQWN
GRNIAEVLQMTVDEASEFFAGEDAVARPLQLLRDIGLGYLRLGQPATELSGGEAQRIKLA
TELQRSQRGRSLYVLDEPTTGLHASDADRLLVQLQRLVDAGNTVVMIEHDMRAVAQADWV
IDVGPGAGAAGGSIVVAGSPQQVARTSGSRTAPFLAQELARART
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacaattctttcggtgaatcctcttgtgccgctgcggccagcggcctcgtgcag
gtgcgtggcgcgcgcgagaacaacctcaaggaggtggacgtctccatcccgcgtaacgcg
ctggtggtgttctcgggtgtctccggctccgggaagtcctcgctggcctttggcaccatc
tatgccgaggcccagcggcgctacttcgagtcggtggccccctatgcgcggcgactgatc
gaccaggccggcgtgccggacgtcgatgcgatcgacggcctgccgccggcggtggcactg
cagcagcagcggggctccagcaacgcgcgttcctctgtgggcagtgtgaccaccttgtcc
agcctggtgcggatgatgtattcgcgcgccggcgcctacccggccggccaaccgatgctg
tacgccgaggatttttcgcccaacacgccgcagggagcgtgcccgacctgctacggcctg
ggccatgtgtacgaggtgaccgaggccatcatggtgcccgatccctccctgagcatccgc
gagcgggcgatcgcctcctggccccccgcctggcaaggccagaacctgcgcgacatcctg
gtcagcatgggctacgacgttgaccgaccgtggaaggacctgccgaagaaggatcgcgac
tggattctgttcaccgaggaaacaccgacggtgccggtgtacgccggcttcacgcccgcc
gaaacccgcgccgcgctcaagcgcaagatggagccgagctacatgggcaccttcaccggc
gccaggcgctacgtgctgcacacctttgccaacacccagagcgcgttgatgagaaagcgc
gtgtcccggttcatggagggcaaaccgtgccccacctgccacggcaagcggctcaagccc
gaggcgctgtcggtcaccttcgccggcgtggacatcggcgcgttcatgcagatgccgctg
gaccagttggcggccttgctcgaacccatcgcccagggcgatttccgcgcccatgcagcg
ggggcggctacggacaaggaagcgacccgacgcgaccgtgccgaacgcgcggcctccggc
cgcgccgtccatgcggtatcgcccgacgtgcgccgcacctcggcgctatcggaagaaaag
cgcctcgccgcgcagcgcctggccggtggcgtgatggcacgcctgcgccaactgcgtggg
ctgggcctgggctacctgacgctggaccgggccacgccgacgctttcggccggcgagttg
cagcgcctgcggctggccacgcaattgagttccctgctgttcggtgtcgtgtacgtgctc
gacgagccctccgcgggcctgcacccctccgatagccaggccctgtacgacgcgctcgac
cggctgcgcgacgccggcaactcggtgttcgtggtggagcacgacttggacctgatgcgc
cgcgcgcaatggctggtggatgtcgggccggatgctggggagcgtggcggccgcgtgctc
tacagcggcgagccggatggcctgcgcaagattgccgaatcgcgtactgcacgctacctg
ttcgatgagatccccgcgccgggaagccgggcacgcgaagcgaccggctggctggagctg
caggacattcaccgccacaacctgcatggcgtgaatgcgcgcattccgctgggcgtgctg
acggccgtcaccggcatctccggctcgggcaagtccagcctcgtggcgcaggccctgccg
gagctggtgctgctgcacctgggccacgagccggaagacgatgcggccgaaagcgccacc
agcgaagggccggcagtgatcgaagcgactggcggtcgtctggcgggcgacgtggacgcc
atacagcgcatggtgcaggtggaccagaaaccgatcgggcgcacgccgcggtcgaacctg
gccacctacacgggcctgttcgaccatgtgcgcaagctgttcgccgccacacccgatgcg
cgacgccgccgctatgacgccgggcgcttctcgttcaacgtcgccaaggggcgctgcgag
acctgcgagggcgagggcttcgtcagcgtggaactgctgttcatgcccagcgtgtacgcg
ccgtgcccgacgtgccatggcgcacgctacaacgaggccacgctgaaggtgcaatggaac
gggcgcaacatcgccgaggtgctgcagatgaccgtggacgaagccagcgaattcttcgcg
ggtgaagacgctgtggcaaggccactgcaactgctgcgcgatatcggactgggctatctg
cgcctggggcaaccggccaccgagctttccggtggcgaggcgcagcgcatcaagctggcg
accgagcttcagcgcagccagcgcggccgaagcctgtacgtgctcgacgagccgactacc
gggctgcatgcgtcggacgctgaccggctgctggtgcagttgcagcgcctggtcgatgcc
ggcaacaccgtggtgatgatcgagcacgatatgcgcgcggtggcccaggccgattgggtg
atcgacgtagggcctggtgcaggcgctgccggcggcagcatcgtggtggcgggctcccct
cagcaggtggcccgaacgtctggcagcagaaccgctccgttccttgcgcaggaattagcg
cgggcccggacgtga
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