Corynebacterium aquilae: CAQU_01665
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Entry
CAQU_01665 CDS
T05112
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
caqu
Corynebacterium aquilae
Pathway
caqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAQU_01665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caqu03021
]
CAQU_01665
03400 DNA repair and recombination proteins [BR:
caqu03400
]
CAQU_01665
Enzymes [BR:
caqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAQU_01665
Transcription machinery [BR:
caqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAQU_01665
DNA repair and recombination proteins [BR:
caqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAQU_01665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APT83991
UniProt:
A0A1L7CDR4
LinkDB
All DBs
Position
373558..377538
Genome browser
AA seq
1326 aa
AA seq
DB search
MLDVNYFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEQARHSDLSTLEAEMLMEKKDVEAEADSDIAERAQKLEED
LAELEAAGAKADARRKVQNAADKEMTHIRERAEREIARLEEIWDTFVKLAPKQMIVDETL
YTELVDRYEDYFTGGMGAEAIQKLIRGFDLDAEAEELRTIINEGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVERQYAQNIKSAKRMVERQR
SEVWDVLEEAIAQHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTLEKPLDEFGGQ
GAYQPATEEGPATGVYSSVAEAIMAYDRGVLGLQAPIKVRISHLRPPADVEAEQFPDGWQ
QGQTWMAHTTLGRVKFNDLLPWNYPYLEGVMVRKGGGTDKIMLGDVINDLAARYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKDEILDRYEAEAREIERKYWQQGALTPRE
RYDRLVELWKDATDTVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
EYITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGIDCLVAVDNGNGTFSRHSLVETSVAGRVLAKDAIGVDGEVVLEAGTDLGELDI
DLLVEKGVKSVKLRSVLTCQTPTGVCAKCYGRSMASGKQVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARIPKNKAPIASVDGRIHLEDEGNFYTLTITPD
DGSDNVVYEKLSKRQGLAYITAPMETNPDATIERELQDGDHVTVGERLLRGPADPHDVLD
ILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGTTEFLPGTLVDL
AEAKIANREAVQNGGQPAELRNEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAISIPTFGDSIYADDTYTGAAV
PLDDFS
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaattactttgacgagctccgtattgggctcgccaccgccgacgacatc
cgtcgttggtccaaaggcgaggtcaaaaagccggagaccattaactaccgaaccctcaag
ccggaaaaggacggcctgttctgcgaacgcatcttcgggcccacccgcgactgggaatgt
gcctgcggtaagtacaagcgcgtccgctacaagggcatcatctgtgaacgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgctccc
gtgacccacatctggtacttcaagggtgtcccctcccgcctcggctacctgttggacctg
gctcccaaagacctggagcgcatcatctacttcgccgccaacatcatcaccagcgttgat
gagcaggcgcgccactccgacctgtccactctcgaagcagaaatgctgatggagaaaaag
gacgtcgaagccgaagcagactccgacatcgccgagcgcgcacaaaagctcgaagaagac
ctcgccgagctcgaagcagccggcgccaaggccgacgcgcgccgcaaggtgcaaaacgcc
gccgacaaggaaatgacccacatccgcgagcgcgccgagcgagaaatcgcccgcctcgaa
gaaatctgggacaccttcgtcaagctcgccccgaagcaaatgatcgtcgacgagaccctc
tacaccgagctcgtcgaccgctacgaggactacttcaccggcggcatgggtgcagaagcc
atccagaaactcatccgcggtttcgacctggatgccgaagccgaagagctgcgcaccatc
atcaacgaaggcaaaggccagaagaagatgcgtgccctcaagcgcctgaaggtcgtcgcg
gccttccagcgctccggcaacgacccggccggcatggtcctggactgcatcccggtcatc
ccgccggagctgcgccccatggtgcagctcgacggtggccgcttcgccacctccgacctc
aacgacctctaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaatccgttgacgca
ctgttcgacaacggtcgacgcggtcgccccgtcaccggccccggcaaccgtccgctgaag
tccctgtctgacctgctcaagggcaagcaaggccgcttccgtcagaacctgctgggtaag
cgtgtcgactactccggccgttccgtgatcatcgtcggcccgcagctgcgcctgcacgaa
tgtggcctgccgaagctgatggctctcgagttgttcaagcccttcgtcatgaagcgcctg
gtcgagcgccagtacgcccagaacatcaagtccgccaagcgcatggtcgaacgccagcgc
tccgaggtgtgggacgtcctcgaagaggccatcgcccagcacccggtgatgctcaaccgt
gcacccaccctgcaccgcctgggcatccaggccttcgagccggtcctggtcgagggtaaa
gccatccagctgcacccgctggcctgtgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtccgcagaagcccaggccgaagcccgcatcctgatgctg
gcctccaacaacatcctgtctcccgcatccggtaagccgctggctatgccgcgtctggac
atggtgaccggcctgtacttcctcaccctggaaaagccgctcgacgagttcggcggccag
ggcgcctaccagcccgccaccgaggaaggccccgccaccggcgtgtactcctccgtcgcc
gaggccatcatggcctacgaccgcggcgtgctgggcctgcaggcacccatcaaggtgcgc
atcagccacctgcgtccccccgcggacgtcgaagccgagcagttccccgacggctggcag
caaggccagacctggatggctcacaccaccctgggtcgcgtgaagttcaacgacctgctg
ccctggaactacccctacctggaaggtgtcatggtccgtaagggcggcggcaccgacaag
atcatgctgggcgacgtcattaacgacctcgccgcccgctacccgatgatcaccgtcgcc
cagaccatggacaagatgaaggatgccggtttctactgggcaacccgctccggcgtgacc
atcaccatgtccgacgtgctggtgcttccgaacaaggacgaaatccttgatcgctacgag
gccgaagcccgcgagatcgagcgtaagtactggcagcagggtgctctcaccccgcgcgag
cgctacgaccgcctcgtggaactgtggaaggacgccaccgacaccgtcggtaaggccgtc
gaggacctgtaccccgacgacaacccgattccgatgatcgtgaagtccggcgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggtcgtgaactccaagggt
gaatacatcacccgcccgatcaagacctccttccgtgagggcctgaccgtgctggagtac
ttcaacaactcccacggctcccgtaagggcctggccgataccgcgctgcgtaccgcagac
tccggctacctcacccgtcgtctcgtcgacgtcgcccaggacgtcatcgtccgcgaagaa
gactgtggcacccgccagggcatcgactgcctggtcgccgtcgacaacggcaacggcacc
ttcagccgccactccctggtcgaaacctccgtggccggccgcgtgctcgccaaggacgcc
atcggcgtcgacggcgaagttgttctcgaagccggcaccgacctcggcgaactcgacatc
gacctgctggtcgaaaagggcgtcaagtccgtcaagctgcgctccgtgctgacctgccag
acccccaccggtgtctgcgccaagtgctacggccgctccatggcctccggcaagcaggtc
gacatcggcgaagccgtcggcatcgtcgccgcccagtccattggtgagcccggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgacatcaccggcggtctgccc
cgtgtccaggaactgttcgaggcccgaatccccaagaacaaggccccgatcgcttccgtc
gacggacgcatccacctggaagacgaaggcaacttctacaccctgaccatcaccccggac
gacggctccgacaacgtggtctacgagaagctgtccaagcgccagggcctggcctacatc
accgccccgatggaaaccaaccccgatgccaccatcgagcgcgagctccaagacggcgac
cacgtcaccgtcggtgagcgcctgctgcgcggcccggccgacccgcacgacgtcctggac
atcctgggtcgccgcggtgtcgaacagcacctcatcgacgaggtgcaggccgtctaccgt
gcacagggtgtggccatccacgacaagcacatcgagatcatcatccgacagatgctgcgt
cgcggaaccgtcatcgaatccggcaccaccgagttcctgcccggcaccctggtcgacctc
gcagaagccaagatcgccaaccgcgaggcagtgcaaaacggcggccagcccgccgagctg
cgcaacgagatcatgggtatcaccaaggcctcgctggcaaccgaatcctggctgtccgcc
gcctccttccaggagaccacccgagtcctgaccgacgccgccatcaacaagcgttcggac
aagctcatcggcctcaaggaaaacgtcatcatcggtaagctgatcccggccggtaccggt
atctcccgctaccgcaacatccaggtcaagccgaccgaggccgcacgctccgctgcgatc
tcgatcccgaccttcggtgactccatctacgccgacgacacctacaccggtgccgccgtg
ccgctggacgacttcagctag
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