Corynebacterium aquilae: CAQU_05175
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Entry
CAQU_05175 CDS
T05112
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
caqu
Corynebacterium aquilae
Pathway
caqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAQU_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caqu03021
]
CAQU_05175
03019 Messenger RNA biogenesis [BR:
caqu03019
]
CAQU_05175
Transcription machinery [BR:
caqu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CAQU_05175
Messenger RNA biogenesis [BR:
caqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAQU_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APT84550
UniProt:
A0A1L7CF98
LinkDB
All DBs
Position
1187859..1189859
Genome browser
AA seq
666 aa
AA seq
DB search
MTEHDTQSGAGKDLASLRLPELKKMAQEMGIRGISGKRKSDLIAMIQSGGAAAATEAAAP
ARRRRRAENTEDTQATVAENTQDQPAEEQAQQPKPRTRTRRRAQNEANDDAPAQESPKSS
EDSDDDRDRDRDRGRRNNRRRNDDRDNEQRHQTEDSSGKEDSEETDENGQPVRYESRSAA
RRARRNRARQNQKDRRRGRDRDDRDQERDDHSDRDNRDRDRDNRDNRDRDRRGDRNDRDD
DRRRGRNRRDRGRGRDRDNRDRDNRDRDNRQDDHDDSNLQYVGGILDIVDNNVAFLRTTG
YNSSPADVFVNPQMIRRFGLRRGDAITGAIKPGRETTHGSGRNRAKYNPLARVDTVNGMS
VEEARQRPDFAKLTPLYPNKRLRLETDPKVLTTRVIDLIMPIGKGQRALIVSPPKAGKTT
ILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTTVAELA
IERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARN
IENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTR
KDELLLGPEEARVMHKLRRILSALDNQQAIDLLIKQLKKTKNNGEFLMQVMSSEHMAIDD
GEEDYS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcacgacactcagagcggtgcaggcaaagaccttgcatcactgcgtctcccg
gagctgaagaaaatggctcaggagatggggattcgggggatctccggaaagcgcaagtcg
gatctgattgccatgatccagtctggcggcgctgctgctgcaacggaggccgcagcgccg
gcccgccgtcgccgccgcgcggaaaataccgaagacacccaggccacggtggctgagaac
acccaggaccagcctgctgaggaacaagcccagcagcccaagccgcgcacccgcacccgt
cgccgcgcccagaatgaggcgaacgacgacgctcccgcacaagagtcgcccaagtcgtcc
gaagattccgacgacgatcgtgatcgcgaccgcgatcgtggccgacgcaacaaccgtcgt
cgcaacgacgaccgcgacaacgagcaacgccaccaaaccgaggactcctccggaaaagaa
gattccgaagagaccgatgaaaacggtcagcccgtccgttacgaatcgcgctccgctgct
cgccgcgcacgacgcaaccgcgcacgccaaaaccaaaaagaccgccgtcgtggacgtgac
cgcgacgaccgcgatcaagaacgcgacgatcactccgatcgcgacaaccgcgaccgtgat
cgtgataaccgggataaccgtgaccgcgatcgtcgtggagaccgcaacgatcgcgacgac
gatcgtcgccggggccgcaaccgccgcgaccgtggtcgtggacgtgaccgcgataaccgc
gatcgtgataaccgggatcgggacaaccgccaggatgaccacgatgactccaacctgcag
tatgttggcggcattttggacatcgtcgacaacaacgtcgcattcctgcgcaccaccggc
tacaactcatcgccggccgatgtcttcgttaatccccagatgattcgccgcttcggtttg
cgccgcggcgacgccatcaccggagctatcaagccgggccgcgaaaccacccatggttcc
ggtcgcaaccgcgccaagtacaacccgttggcacgcgtcgacacggtcaacggaatgagc
gtcgaggaagcccgtcagcgtcccgactttgccaagctgaccccgctgtaccccaacaag
cgtttgcgtctggaaaccgacccgaaggtcttgaccacccgtgtcatcgacctcatcatg
ccgatcggtaagggacagcgcgcgctgatcgtgtcgcctccgaaggccggtaagaccacc
attttgcaaaacattgcaaacgcgatcgcgaccaacaaccccgagtgctacttgatggtc
gttctggtcgacgagcgccccgaagaggtcaccgacatgcagcgcagcgtgaagggcgaa
gtgattgcttcgaccttcgaccgcccgccgagcgagcacaccaccgtcgctgagctggcc
atcgagcgcgcaaagcgtttggtggagcaaggccaggacgtcgttgtcctgttggactcc
atcacgcgactgggccgtgcctacaacaacagctcgcccgcctccggccgaatcctgtcc
ggtggtgtcgactccaacgccctgtacccgcctaagcgcttcctgggtgctgcccgcaac
atcgaaaatggtggctccctcaccatcatcgctacggcaatggtggagaccggttccgcc
ggcgacaccgtgatcttcgaggaattcaagggcaccggtaacgctgagctcaagctggat
cgcaagatttccgaacgccgcgttttccccgcggtcgacgtcaatccttccggcacccgt
aaggacgagctgctgctcggcccggaggaagctcgcgtcatgcacaagctccgccgaatc
ctgtccgcgctcgataaccagcaggctatcgacctgctgatcaagcagctgaagaagacg
aagaacaacggcgagttcttgatgcaggtcatgagctccgagcacatggcgatcgacgac
ggcgaggaggattactcctaa
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