Corynebacterium aquilae: CAQU_07540
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Entry
CAQU_07540 CDS
T05112
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
caqu
Corynebacterium aquilae
Pathway
caqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAQU_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caqu03019
]
CAQU_07540
Messenger RNA biogenesis [BR:
caqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAQU_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
APT84943
UniProt:
A0A1L7CGR0
LinkDB
All DBs
Position
complement(1738565..1740637)
Genome browser
AA seq
690 aa
AA seq
DB search
MTEPRSRSRKSTREAGAPQPVEFQAPQPVAESGQREDSGNDSRGTQNRGRGGSNSSRNSD
NSGNRNRGRGRGRGGNGSSNSGGNNNSGKSGNNKDNHGRGRGRRIKSMQGADLTQRLPEP
PKAPRDGLRIVALGGISEIGRNMTVFEYHNKMLLVDCGVLFPSSGEPGVDLILPDFSYIE
DRLDKVEALVVTHGHEDHIGAIPWLLKLRPDIPIIASRFTCALIAAKCQEHRQRPKLIEV
NEQSHEKRGPFDIRFFAVNHSIPDCLGIAIKTGAGLVVHTGDIKLDQTPTDGRPTDLPAL
SRFGDEGIDLFLCDSTNATTPGVSGSESEIGPTLKRLVTNAKQRVILASFASNVYRVQSA
VDAAVAAGRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIISMDEAAKLAPHKVLLVTTGTQ
GEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTGRDA
KVHTSGHGYAGELLFLYNAARPRNAMPVHGEWRHLRANKELAISTGVERDRVVLAQNGVV
VDLDNGRAQVVGQISVGNLYVDGVTMGDIDAEVLADRTSMGEGGLISVTAVIDNRTGRVL
EVPAVQARGFSEDAKAMMPEVRELVYNTMMDLAAEGENEVYRMAQKLRRTVARYVEQKWR
RKPMVVPTIVPMTGEVTVTDEDINSARQSL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccccgttcacgttcccgtaaatcaacccgcgaagcgggcgcaccgcagccg
gtcgagtttcaggctccccagcctgtcgctgagtccggtcagcgtgaagattctgggaac
gattcccgcggcacgcaaaatcgcggccgcggtgggtccaactcttcccgcaacagcgac
aactccggcaaccgcaatcgcggtcgtggccgcggtcgtggcggaaacggttcctccaac
agcggtggaaacaacaactccggcaagtccggaaacaacaaggacaaccacggccggggc
cgtggccgtcgcatcaagtccatgcagggtgcggatctgacgcagcgcctcccggagccg
ccgaaggctccccgcgatggcttgcgcattgtcgccctgggtggcatttccgaaatcggt
cgcaacatgaccgtgttcgagtaccacaacaagatgctgctggttgactgtggcgtcctg
ttcccctcctccggtgagccgggtgttgacctgatcctgccggatttctcctacatcgaa
gatcgcctcgacaaggtggaagccctggtggtgacccacggtcacgaggatcacatcggt
gctatcccgtggctgctgaagctgcgtccggatattccgatcattgcttcccgctttact
tgcgccttgatcgccgcgaagtgccaggagcaccgtcagcgtccgaagctgattgaggtc
aacgagcagagccatgaaaagcgtggcccgttcgatatccgattctttgccgtcaaccac
tccattccggactgcttgggcattgctatcaagaccggtgctggcctggtggtacacacc
ggcgacatcaagctggatcagaccccgaccgatggtcgccccacggatcttccggcgctg
tcccgcttcggcgacgagggcatcgacctgttcttgtgtgactccaccaatgccacaacc
ccgggtgtttccggttccgaatcggagatcggccccaccttgaagcgtctggtgactaac
gctaagcagcgtgtgatcctggcgtcgttcgcatcgaacgtttaccgtgtccagtccgcg
gtggatgccgccgttgctgccggccgtaaggtcgcattcaatggtcgctccatgatccgc
aacatggaaatcgcggagaagatgggctacctcaaggcgccccgcggcaccattatttcc
atggacgaggctgcgaagctggctccccacaaggtgctgctggtcaccaccggcacccag
ggcgagcccatggcagcactgtcgcgcatggcccgccgcgagcaccgccagattacggtt
cgcgacggcgacctgatcattttgtcctcctcgctggttcccggcaatgaggaagcggtc
tttggcgtcattaacatgctggcccagattggtgccactgtcgtcaccgggcgcgatgct
aaggtgcacacctctggccacggctatgccggcgagctgctgttcctctacaacgccgct
cgtccccgcaacgccatgccggtgcacggcgaatggcgccacctgcgcgccaataaggaa
ctggcgatctccaccggtgttgagcgcgaccgcgtcgtgctggcacaaaacggtgttgtc
gtcgacctcgataacggtcgcgcacaggtagttggccagatcagcgtcggtaacctctac
gtcgacggtgtcaccatgggtgacatcgacgctgaggttcttgctgaccgtacttccatg
ggtgaaggcggcctgatttcggtcaccgccgtcatcgataaccgcaccggccgtgtgctg
gaagtgcctgccgttcaggctcgtggcttctccgaggacgcgaaggcaatgatgcccgag
gttcgcgagctggtgtacaacaccatgatggatcttgcagccgaaggcgaaaacgaggtc
taccgtatggcgcagaagctgcgtcgcactgtggcccgttacgtggagcagaagtggcgc
cgtaagcccatggttgtgcccaccattgttccgatgactggtgaagtgaccgtgaccgac
gaggatattaactccgcccgtcagtccctgtaa
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