Corynebacterium aurimucosum: cauri_0369
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Entry
cauri_0369 CDS
T00887
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
car
Corynebacterium aurimucosum
Pathway
car03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
car00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
cauri_0369 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
car03021
]
cauri_0369 (rpoC)
03400 DNA repair and recombination proteins [BR:
car03400
]
cauri_0369 (rpoC)
Enzymes [BR:
car01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
cauri_0369 (rpoC)
Transcription machinery [BR:
car03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
cauri_0369 (rpoC)
DNA repair and recombination proteins [BR:
car03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
cauri_0369 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ACP31968
UniProt:
C3PKN2
LinkDB
All DBs
Position
407712..411707
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVEAEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGEDEIGGE
GRYQPATEDRPEQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPSDIEAEQFPDGWQ
KGQAWLAETTLGRIMFNDLLPWNYPYLEGVMVRKGGAGNKMLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMHDVLVLPNKTEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGNAVEEMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGIEVAPGSYDLHELWETSASGRVVANDVKDENGEVIAEAGTDLTEELS
RTIVNAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVSTGDRLMRGAPDPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
QLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLEEDYTF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcgggctggccaccgcagaggacatc
cgtcgctggtccaagggcgaggtcaagaaacccgaaaccattaactaccgcaccctgaag
ccggagaaggacggccttttctgtgagcgcatcttcggcccgacccgtgactgggagtgc
gcctgcggtaagtacaagcgcgtgcgctacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgtgagcgcatgggccacatcgagctggccgcgccg
gttacccacatctggtacttcaagggcgttccttcccgcctgggctacctgctggaccta
gctccgaaggaccttgagcgcatcatttacttcgccgccaacatcatcacctccgtggac
gaggaagctcgccacaatgaccagtccactctggaagcagaaatgctgctggagaagaag
gacgtggaggatgacgtcgaggcagagatcgctgagcgcgctgccaagctcgagcaggat
ctggccgagctggaggccgccggcgctaaggccgacgcccgccgcaaggtccagaacgct
gccgacaaggagatgcagcacatccgcgagcgcggtgagcgtgaggtcgctcgcctcgat
gaaatctggaacaccttcatcaagctggctccgaagcagatgatcatcgatgagaccatc
tacgaagagctggttgaccgctacgaggattacttcaccggcggcatgggtgcagaggct
attcagaccctcatccgcaacttcgacctcgaggctgaggccgaggagctcaaggagatc
atcaacaacggcaagggccagaagaagatgcgtgccctcaagcgcctgaaggttgttgca
gccttcctgcgctcgggcaacgacccggccggcatggtcctggatgctatcccggtgatt
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgttgacgcg
ctcttcgacaacggccgccgcggccgtccagtcaccggcccgggtaaccgcccgctgaag
tccctgtctgacctgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggccgttccgtgattatcgttggtccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggctctggagctgttcaagcccttcgtcatgaagcgtctg
gtagagaacgactacgcgcagaacatcaagtccgctaagcgcatggtggagcgccagcgc
cctgaggtgtgggacgtcctcgaagaggccatttccgagcacccggtgatgctgaaccgt
gcacctaccctgcaccgcctgggtatccaggccttcgagccgaagctcgtcgaaggtaag
gccatccagctgcatccgctggcttgtgaggctttcaacgctgacttcgacggtgaccag
atggcagtccacctgccgctgtccgccgaggcacaggctgaggcccgcgtgctgatgctg
gcttccaacaacattctgtctccggcctccggtaagccgctggctatgccgcgcctggat
atggttaccggcctgtactacctcaccatggataagggtgaggacgagatcggtggcgag
ggccgttaccagcccgccaccgaggaccgtccggagcagggcgtgtactcctcttacgcg
gaggccatcatggcccgtgaccgcggcgttctgggcctgcaggccccgatcaaggtgcgc
atctctcacctgcgtccgccgtcagacatcgaggcagagcagttcccggatggttggcag
aagggtcaggcatggctcgctgagaccaccctgggccgcatcatgttcaatgacctgctg
ccgtggaactacccgtaccttgagggcgtcatggtccgtaagggcggcgctggcaacaag
atgctgctgggcgacgtcattaatgacctcgctgccaagtacccgatgatcaccgttgcc
caggttctggacaagatgaaggacgcgggcttctactgggccacccgttccggcgtgacc
atcaccatgcacgacgttctggttctgccgaacaagaccgaggttctcgagtcttatgag
aaggaagcagagcgcatcgagcgcaagtactgggagcagggtgccctgaccgagcgcgag
cgctacgaccgcctggtggagctgtggaaggatgccacggacaccgtgggtaacgccgta
gaagagatgtaccccgacgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgcgagggcctgtcggttctggagtac
ttcaacaactcgcacggttcccgtaagggtctggcggataccgctctgcgtaccgctgac
tccggctacctcacccgtcgtctggtggacgtggcgcaggacgtcatcgtccgcgaggag
gactgtggcacccgccagggcgtgcgcgtcccgctcggcatcgaggttgcccctggctcc
tacgacctgcacgagctgtgggagacctccgcctccggccgcgtcgtggctaacgacgtc
aaggatgaaaacggcgaggtcatcgctgaggcaggcaccgacctgactgaggaactcagc
cgcacgatcgtcaacgctggtgtgctggaaatcaaggtccgctccgtgctgacctgccag
accccggccggtgtctgtgccaagtgctacggcaagtccatggcctccggccagctggtc
gatatcggcgaggccgtcggcatcgtggccgcgcagtccattggtgagccgggtacccag
ctgacgatgcgtaccttccaccagggtggtgtcggtggcgatattaccggtggtctgccg
cgtgttcaggagctcttcgaggcccgtaacccgaagaaccgtgcgcctatcgcctctgtc
gacggcaccgtctccctatccgatgagggcaacttctggacgctgaccatcacccctgat
gatggctccgacaacgtcgtttatgagaagctgtcgaagcgccagggcctggctcaggtt
cgccgcccgatggagtccaacccggatgcgatgattgagcgctccctgcgcgacggtgac
cacgtcagcaccggtgatcgcctcatgcgtggtgcacctgacccgcacgacgtgctggag
gtcctcggccgccgtggtgtggaaaagcacctcatcgacgaggtccaggctgtctaccgt
gcacagggtgtggccatccacgacaagcacatcgagatcatcatccgccagatgctgcgt
cgcggtaccgtcatcgacgctggtaccaccgacctgctgccgggcaacctcattgacctc
tctgaggccaagcaggttaacgccgcacaggtcgctgagggaggccagccggctcagctg
cgcagcgagatcatgggtattaccaaggcctcgctggctacggagtcctggctgtcggcg
gcctccttccaggagaccacgcgtgtgcttaccgacgccgctattaacaagcgctcggat
cagctcattggtctgaaggagaacgtcatcatcggtaagctgatcccagccggtaccggt
atttcccgttaccgcaacatcagcgttaagccgactgaggctgcacgcaacgctgcgtac
tccatcccgacctacggtgattccatctacggcgacgacggcttcggtgagttcaccggc
gcctccgtcccgctggaggaggactacacgttctag
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