Corynebacterium aurimucosum: cauri_1027
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Entry
cauri_1027 CDS
T00887
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
car
Corynebacterium aurimucosum
Pathway
car03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
car00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
cauri_1027 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
car03019
]
cauri_1027 (deaD)
03009 Ribosome biogenesis [BR:
car03009
]
cauri_1027 (deaD)
Enzymes [BR:
car01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
cauri_1027 (deaD)
Messenger RNA biogenesis [BR:
car03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
cauri_1027 (deaD)
Ribosome biogenesis [BR:
car03009
]
Prokaryotic type
rRNA helicases
cauri_1027 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
adh_short
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACP32624
UniProt:
C3PFM0
LinkDB
All DBs
Position
1141336..1143345
Genome browser
AA seq
669 aa
AA seq
DB search
MSITDNATGGVNEPEEFNKSESQENSQGGEALDASQVSNQDTGAANNPEDTGAEETSAND
NSQGFAHLGLPDDVQEAVSKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALP
VLSQIDTEARYPQALVLAPTRELALQVADSFQSFADHLGRIEVLPIYGGQAYGIQLSGLR
RGAQIIVGTPGRVIDHLEKGSLDISQLRFLVLDEADEMLNMGFQEDVERILEDTPEDKQV
ALFSATMPNSIRRLSKQYLNNPAEVTVKSERRTNDNITQRFLLTPHRHKMDAFTRILEVI
DYDAIIVFCRTKHATEDVADSLKEAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATD
VAARGLDVDRITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERV
TNARLEEMDLPTADEVNAKRKEKFFASIGASQQDKQFDFFRDMVREYSAAENVAMDDIAA
ALAVQLQGGTDFLLKERPVSKKDRRERDRFERDGRGRDRGDRGRDRGGRERDRGPRRPDG
DFETYRLDVGKRQNVRPGAIVGALANEGGLSSKDFGRITIAVGHTLVDLPKNLDPAVLER
LKDTRISGQLIKIQKDTGRPPRRNYDDDRGRGGYGGRGRGGRGERGGYRDRDRGGHGCDR
GGRRGGWRD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtcaacgagccggaagaattcaataagtcg
gaatctcaggaaaactcgcaaggtggcgaagcattggacgcttcgcaggtgtcgaaccag
gacaccggggctgcgaataaccctgaggacaccggcgctgaagaaacttcagccaacgac
aactcccagggttttgcacacctcggccttcccgatgacgttcaggaagccgtgtccaag
gtgggctttaccaagccatccccaattcaggaagaaaccatcccgatcctcatggagggc
cgcgacgtcgtcggcctggctcagacgggtacgggtaagaccgcggccttcgcgctgccg
gttctctcccagatcgataccgaggcccgctacccgcaggctttggtcctcgcgcccacg
cgcgagctggccctccaggttgcggattctttccagtccttcgccgaccacttgggccgc
atcgaagttctgcctatctacggtggccaggcttatggcattcagctctccgggctgcgc
cgtggcgcccagatcatcgtgggcaccccgggccgcgtcatcgaccacctggagaagggc
tccctggacatttcgcagctgcgcttcctcgtcctcgatgaggcggacgagatgctcaac
atgggcttccaggaagacgtcgagcgcattcttgaggacaccccggaagacaagcaggtc
gcactcttctcggccaccatgccgaactcgattcgccgcctgtccaagcagtacctcaac
aaccccgctgaggtcactgtgaagtcggagcgccgcacgaatgacaacatcacgcagcgc
ttcctgctgaccccgcaccgccacaagatggatgccttcacccgtatcctcgaggtcatt
gactacgacgccatcatcgtcttctgccgcaccaagcacgcgaccgaggacgtggccgat
agcctcaaggaggccggctacaacgctgccgccatcaacggcgatattgcccagcagcag
cgtgagcgcaccgtcgatcagctcaaggatggccgcctcgacatcctcgtggctaccgac
gtggctgctcgtggtctcgatgttgaccgcattacccacgtggtcaactacgacatcccg
aatgacaccgagtcctacgtgcaccgcatcggccgtaccggccgtgctggccgcactggt
gaagccatcctgtttgtcaccccgcgtgagcgccgcatgctgcgctccatcgagcgcgtg
accaacgcccgcttggaggagatggatctcccgaccgcggatgaggtcaacgccaagcgc
aaggagaagttcttcgcttccatcggcgcctcccagcaggacaagcagttcgacttcttc
cgcgacatggtgcgcgagtactcagcagcagagaacgtggcgatggatgatatcgccgcc
gccttggctgtgcagctgcagggcgggacggacttcctgctcaaggagcgcccggtatcc
aagaaggaccgtcgcgagcgcgatcgctttgaacgcgacggccgtgggcgcgatcgtggt
gaccgtggccgtgaccgcggcggccgcgagcgtgaccgtggcccgcgccgcccggatggg
gactttgagacgtaccggctggacgtcggcaagcgccagaacgtgcgccccggcgccatc
gtgggtgcgttggccaatgagggtggcctgtcctctaaggacttcggccgcatcaccatc
gcggtgggccacaccttggtggacctgccgaagaacctggacccggcggtgctggagcgt
ctgaaggacacccgcatctccggacagctcatcaagatccagaaggataccggccgcccg
ccacgccggaactacgatgacgaccgtggccgtggcggttacggcggacgtggtcgtggc
ggacgcggtgagcgtggcggataccgcgaccgtgaccgcggtggacatggctgcgaccgt
ggtgggcgccgcggcggctggcgtgactag
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