Coffea arabica (coffee): 113687619
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Entry
113687619 CDS
T11342
Name
(RefSeq) agamous-like MADS-box protein MADS1
KO
K09264
MADS-box transcription factor, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113687619
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
113687619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HMMR_N
ZapB
Motif
Other DBs
NCBI-GeneID:
113687619
NCBI-ProteinID:
XP_071905053
UniProt:
A0ABM4UCP1
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Position
5e:49319521..49328472
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AA seq
245 aa
AA seq
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MDCPSQDHQFDQSSSSQLRKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCD
AEVALIVFSSRGRLYEYANNSVRGTIERYKKACADSSNPGSVSEANAQFYQQEASKLRKH
IREIQISNRHILGEGVDGLNFKELKNLEGKVEKAIGRIRTRKNELLFAEIELMHKREIEL
QNANTYLRAKIAENERAQQHMNLMPGSEYQPLAPQPYDVRNFLPVNLLEPDQHYSRQDQT
ALQLV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcctagtcaagatcatcaatttgatcagtcgtcctcttctcagctcagaaaa
actggaagagggaagattgagatcaagaggatagaaaacactacaaatcgacaagtcacc
ttctgcaagcgtcgtaatggcctcctcaagaaggcttacgaattgtctgtgctttgtgat
gctgaagttgctctgattgtcttctccagccgcggccgcctttacgaatatgctaataac
agtgtcagggggaccattgagaggtacaagaaagcctgtgctgattcatcaaatccagga
tctgtttctgaagctaacgcccagttctatcagcaagaagctagcaagctcaggaaacat
ataagagagatacagatttcaaacagacacatcctgggtgaaggggtagatggattaaac
ttcaaagaactgaagaatcttgaaggtaaagtggagaaagccattggcagaatccgtacc
aggaagaacgagttattgtttgctgaaatcgagcttatgcataagagggaaattgagctg
caaaatgccaatacgtacctgagagcaaagattgcagaaaacgaaagagcacagcagcac
atgaacttaatgccagggtctgaataccagcctcttgctccacagccttatgatgttagg
aacttcctcccagtaaacctcctggaacctgatcaacattactctcgccaggaccaaact
gctcttcaactcgtctaa
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