Coffea arabica (coffee): 113687789
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Entry
113687789 CDS
T11342
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit 2, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00900
Terpenoid backbone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113687789
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
carb01006
]
113687789
Enzymes [BR:
carb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113687789
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113687789
2.5.1.29 geranylgeranyl diphosphate synthase
113687789
Prenyltransferases [BR:
carb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113687789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
FlgT_M
Motif
Other DBs
NCBI-GeneID:
113687789
NCBI-ProteinID:
XP_071905419
UniProt:
A0ABM4UDQ4
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All DBs
Position
5e:complement(52898893..52900744)
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AA seq
307 aa
AA seq
DB search
MARALSTCNGRANLFGSSTSNLLSPSSVCYRPLVVRMSREQPYWANIEADVETHLKEAIP
IRHPVSVFEPMHHLAFAAPRTTAPALCIAACELVGGHRSQAMAAASAIQLMHAAASAHEQ
LPLTDRTRPKTKPATERKFGPNIELLTGDGIVPFGFELLADSLYSAQNNPDRVLRVMTEI
ARATGSQGVVDGQFREFIISQSDEEGAVDASSIEYVSRKKEGELHACAAACGAILGGGSE
AEIEKLRSYGLYAGTIQGMLYGIGRNQKGVREMVENLRALALKEVESFKNREIEAISSLV
EPELSFV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctagagctctttcaacttgcaatggaagggcgaatcttttcgggtcctccacatca
aatcttcttagcccttcgtcagtatgttacaggcctctggtggtcagaatgtcccgagag
caaccttactgggcaaatatcgaagcggacgtcgaaacacatctaaaggaagccatccca
atccggcatccggtttcggtcttcgagcccatgcatcatctagcctttgcagcgccgaga
accacagccccggccctgtgcattgctgcttgtgaactcgtcggcggccaccggagccag
gccatggctgcggcgtctgctattcagctcatgcatgcagctgcgtctgctcacgagcag
cttcccttgaccgacaggaccaggcccaagaccaagcccgcaacggaacgtaagttcggc
cccaatattgagctcctgaccggggacggaatcgtgccatttgggttcgagctgctggct
gattcgctgtattcagcccaaaacaatccggatcgggtgttgagggtaatgaccgaaatc
gccagggccacaggatcgcagggggtggtggatggccaattcagggaattcatcatcagc
caatcggatgaggaaggggcggtcgatgcgagctcgattgagtatgtgagcaggaagaaa
gaaggtgaactgcatgcttgtgctgcagcttgtggagcaatattaggaggcggcagcgag
gcagaaatcgagaagttgagaagctatggactctatgccggaaccatacaaggaatgcta
tatggaattggaagaaatcaaaagggagtgcgagaaatggtggaaaatttgagagcactg
gccctgaaagaagtggaaagtttcaagaacagagaaattgaggcaatttctagcttggtg
gagcctgaactcagcttcgtctag
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