Coffea arabica (coffee): 113687962
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Entry
113687962 CDS
T11342
Name
(RefSeq) nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113687962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113687962
03036 Chromosome and associated proteins [BR:
carb03036
]
113687962
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113687962
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113687962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
113687962
NCBI-ProteinID:
XP_027061322
UniProt:
A0A6P6S7C9
LinkDB
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Position
5e
Genome browser
AA seq
1333 aa
AA seq
DB search
MFSPGRRKSSYGSAAAARKDQNATEKSNDSSLASPKTPLQDSNVIPNRPATGTPAPWASR
LSVLARIPPVKRNEKGDDVDLVQPVYVGEFPLAVRDEQQAALVQKQYPGEMSISGGMDKE
TSLAWVICRDRLFVWNYFSPTASRNCVVLDLPSSTFETRDSSRNAFNSNTWLVCILNWDC
LNRNSDKLISQSNSAGIIVCNRRSRTLVYWPEIYSESRSAPVLSSASVEELEVLLLPGDG
KANYNKQRQRTKQGSSITGLSSLNSLIATPVLGANHVCVSLACSSNGDLWQFFCSPFAIE
RKKIFQDMLGTASSGGDSSHLVGSKGYPRSLTWQLFNSFSETKRQFLLLTDREIQCFCVK
LTPDYNVSKLWSHEIVGTDGDLGIQKDLAGQKRIWPLDLQIDNDGKVITILIAIFCKDRI
TSSSYTEYSLLTMQYRSGLSISTENVKPTSERVLEKKAPIQVIIPKARVEDEEFLFSMRL
KIGGKPAGSVIILSGDGTATVSHYWRNSTRLYQFDLPYDAGKVFDAAVFPSSDDGEDGAW
AVLTEKAGIWAIPERAILIGGVEPPERSLSRKGSSNERSSQEERKNISFSGNIPPRRASS
EAWDAVDRHRAPLTGIAHRNAQDEESEALLNQLFNDFLLSGQVEGSVDKLKYSGAFERDG
ETNVFTRMSKSIVDTLAKHWTTTRGVEIVALSIVSTQLIEKQQKHQKHLQFLALSKCHEE
LCTKQRQSLQIILEHGEKLAGMLQLRELQNMICQSHTNGVSSSYSRSETQTSGALWDLIQ
LVGERARRRTVLLMDRENAEVFYSKVSDIEDLFYCLEKQLDSMIGEDMPFTVQFQRACEI
SNACVSILQTAMHYRSEHHLWYPSPDGLTPWYCQTVVRSGIWSIASFMLQLINETFRLDD
AKKLDFYSHLEVLSEVLLDAYSGAITAKSERNEEQKGLLDEYWKRRDALLDSLHKQVKGF
FQAKLQDPDGGTEVQNDEVIRKLSSKLLHIAKRHEGYQTLWSICCDLNDSELLKNLMHES
MGPRGGFSNFVFKQLYDSKQYSRLMRLGEEFQEELAIFLKQHQDLRWLHEVFLNQFAAAS
ETLHVVGLSQEDSSGLANEETHFCGTTNRTTLAERKHFLNLSKIAAMAGRNVDCPAKVKR
IEADLNILKLQEEILGLLPDGDEKHNIGNRLLPPVDLIELCLKNQNRLLALRAFDVFAWT
SFFFLKCNSSLLEECWRNAANQDDWERIYQLSVTEGWSDEETLHSLQETVLFQASTICYG
PEAKTFDGGFDEVLPLRQENLEVEYVKDVSSSVEAILMQHKDFPDAGKLMLTAIMLGSAH
AGTVINESCFPME
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgttttctccgggaagaaggaaatccagctatggcagcgcagcagcagctcgtaaggat
caaaatgcaacagaaaagagtaatgattcttctttggcatcgccaaaaactccacttcaa
gatagcaatgtaattcccaatcgcccggccactggcactcctgctccttgggcgtctcgc
ctctctgtccttgcccggattccaccagttaagagaaatgaaaaaggagatgatgtggac
ctagttcaacctgtgtatgttggagagtttcctttagctgtacgtgatgaacaacaagca
gccttagtgcaaaaacagtatcctggtgagatgtccatatctggaggaatggacaaggaa
acatctctggcttgggttatatgcagagacaggctctttgtctggaattacttttctccc
actgcttcaaggaattgtgttgttcttgaccttccttctagtacttttgaaaccagggat
tccagcagaaatgcattcaattctaacacttggttagtttgtatcctcaattgggactgc
ttaaataggaatagtgacaaattgatctcacagtctaattcggctggcattattgtatgc
aatagaagaagtcgaactcttgtatactggccagagatctactctgaaagtagaagtgct
ccagttcttagttctgcttcagttgaggagttggaggtgttacttttgcctggtgatggg
aaagccaattataataagcaacggcaacgtactaagcaggggagttctattacaggattg
agttccttaaactctttgattgcaactcctgttctaggtgccaaccatgtttgtgtctcc
cttgcatgtagttccaatggtgatctttggcagtttttctgcagcccatttgctattgaa
cggaaaaaaatttttcaggacatgctaggtacagcctcttcaggtggtgatagtagccat
ttagttggaagtaaggggtaccctaggtcattgacttggcagttgtttaattcattcagt
gaaactaaaagacagtttcttttattgacagatcgtgagatacagtgtttttgtgttaaa
cttacacctgattataatgtatccaagctctggtcacatgaaattgtaggcactgatggt
gatttgggtatccagaaggatctagctgggcaaaagaggatctggcccctggatctgcaa
attgacaatgatggaaaggttatcactattcttattgctattttttgcaaagatcgaatc
actagttcaagctacaccgaatattcacttctgaccatgcaatataggtctgggttgagc
atttcgacggaaaatgttaaaccaacatctgagagggttttggaaaagaaggccccgatc
caggtaataatacctaaagcaagagtagaagatgaggaattcttattttcgatgaggctg
aagattggtggcaagccagctggttcggtcattatactttctggtgatggaactgcaact
gtgtcgcattactggagaaattctactcgtctctaccaatttgacctgccttatgatgct
ggcaaggttttcgatgctgctgttttcccttcttcagatgatggtgaagatggagcttgg
gctgtactgactgagaaagctggaatctgggcaattcctgagagggctattttgattggt
ggagttgaaccacctgagcgaagtttgtctcgcaaagggagctcaaatgaaagatcatca
caggaagaaagaaaaaacatctcattttctggcaatatccctcctcgaagggctagttca
gaagcatgggatgctgtggatagacatagggcacccttaactggaattgcacatcgaaat
gctcaagacgaagaatctgaagcattactgaatcagcttttcaatgattttctcttgtct
gggcaggttgaaggatcagttgataaactaaaatattccggggcatttgaaagagacggt
gaaacaaatgtttttactaggatgagcaaatcaattgtggataccctagccaaacattgg
acgacaaccaggggagttgagattgtggctttgtcaattgtgtcaacccagctcatcgag
aagcaacagaagcatcagaaacatcttcagttcctagctctatccaagtgtcatgaggaa
ctgtgtactaaacagagacagtcactgcaaattattttggaacatggtgaaaagcttgcc
ggaatgctccaactcagggagctgcagaatatgatttgccagagtcatacaaatggagtc
agctcttcttactctcgttcagaaactcaaacctctggtgctctttgggatcttatccag
ttagttggtgagcgagcccgtaggagaactgttctattgatggatagagagaatgctgaa
gtattctacagtaaggtttcagatattgaggacttgttttactgcttagagaaacaatta
gacagcatgattggggaagatatgcctttcactgttcagtttcaaagagcttgtgaaatc
tcaaatgcatgtgtaagcatacttcagactgcgatgcactacagaagtgagcatcacctc
tggtatccttctcctgatggcttgacaccatggtactgccaaactgttgtaagaagtggc
atttggagcattgcatctttcatgcttcagctgatcaatgaaacatttcgccttgatgat
gctaagaagttggacttttattctcatctagaagtactttctgaagttttacttgacgcc
tattctggagctataacggcgaaatctgaacgcaatgaagaacagaaaggcctgctagat
gaatactggaaaaggagagatgcacttcttgactccctccataagcaagtaaaagggttc
ttccaggccaaactccaggatccagatggaggaacagaagtacaaaatgacgaagttatt
agaaagctttcttctaagttgttgcatattgctaaaagacatgaagggtatcagacactt
tggagtatttgctgtgaccttaatgattccgagctccttaagaatcttatgcatgagagc
atgggacctagagggggtttcagcaactttgtcttcaagcagctgtatgacagcaaacaa
tattccagactgatgagacttggggaggagtttcaagaagagcttgctattttcttaaag
cagcatcaagatcttcgttggcttcatgaagtgtttcttaatcaatttgctgctgcttct
gaaactcttcatgttgtaggtctgtctcaagaagattcatcaggtctggctaacgaggaa
actcatttttgtggcacaaccaacagaacaaccttggcagaaaggaagcattttctcaat
ctgtcaaagatagctgcaatggcaggaaggaatgttgattgtcccgcaaaggtgaagcgc
attgaagctgatctgaatattctgaaattgcaggaagaaatattggggctccttcctgac
ggtgatgaaaagcacaatattggaaacaggcttctccctcctgtggacctaattgaattg
tgcctgaaaaaccagaacaggctccttgctttgcgagcatttgatgtttttgcgtggaca
agcttcttcttccttaagtgcaactctagccttttggaggagtgctggaggaatgcagca
aatcaggatgactgggaaaggatctatcagttgtctgtcactgaagggtggagtgatgag
gaaaccctacattctcttcaagaaacagttctttttcaggcgtctactatatgctatggg
cctgaagcaaaaacttttgatggtggattcgatgaagtactgcccctgaggcaagagaat
ctggaagttgagtatgtgaaggatgtatcttcatcagtggaagcaattctgatgcagcac
aaagattttcctgatgctggcaagttgatgcttactgctattatgctgggaagtgctcat
gctggtactgtaattaatgagagttgtttcccaatggagtga
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