Coffea arabica (coffee): 113688037
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Entry
113688037 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X2
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113688037
Enzymes [BR:
carb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
113688037
Ribosome biogenesis [BR:
carb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
113688037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
FtsJ
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Ubie_methyltran
Methyltransf_11
TehB
Motif
Other DBs
NCBI-GeneID:
113688037
NCBI-ProteinID:
XP_027061426
UniProt:
A0A6P6S6B9
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All DBs
Position
5e
Genome browser
AA seq
489 aa
AA seq
DB search
MPILGPFNPTSKTQKLNVEVSPHRAVSAVRLMRIELGGAFADLLNEQGKGSGDNEMRYVE
RTLGFRTRDLDDRDLRLVTDIVGGTIRWRRYLDHLILSLCHDEDTFRGMEPLLLQILRIG
FYEIVKLEMPPYAVVDENVRLAKVALRPGAGNLVNGILRKLVLLKESNTLPSPKVEGDDR
QQARALATIYSHPVWMVRRWIKFLGHEEAIRLMIWNNRDPTFNLRANISKGFRRADLIEQ
LEKLKVPHDISPHLDDFVRIKTGMQIVIQAGLLKDGFCSVQDESAGLVVSIVDPQPGESI
LDCCAAPGGKTLFLASCLYGKGMVTAVDINKGRLRILKETAKKHQVQNVVTAVHADLRTF
AENNHVMYDKVLLDAPCSGLGVLSKRADLRWNRRLEDMEQLKALQDELLDSASVLVKPGG
LLIYSTCSIDLEENEQRVASFLLRHPEFVVDTADGYVPHEFVAENGFYHCNPVKHSLDGA
FAARLIRSY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccaattttaggtcctttcaatcctacaagcaagacccagaagctaaatgtggaagtt
tcacctcacagagctgtgtctgctgttaggttgatgcgaatagagcttggtggtgctttt
gctgacctattgaatgagcaaggaaagggttcgggggataatgagatgcggtatgttgaa
aggactcttggatttcgcactcgagacttggatgatagggatttgagactggttaccgac
attgtgggaggcaccattcgctggagaagatatcttgatcatctgattctttcattatgc
catgatgaagacacatttagaggcatggagcctcttcttttacagattcttcgaattggt
ttctatgaaatcgtgaagttagaaatgcccccatatgctgttgtggatgagaatgtgaga
ctggccaaggtcgccctcagacctggtgctggtaacttggtcaatggaattctgagaaag
ctagttttactcaaggaaagtaacacccttccttcaccaaaagtggagggtgatgatcgt
cagcaagcacgtgctcttgcgactatttattctcatccagtttggatggtcagacgctgg
ataaaatttcttgggcatgaagaagcaattagattaatgatatggaacaacagagatcct
actttcaatctgagggcaaacattagtaaaggttttcgaagggctgaccttatagaacag
cttgaaaagttgaaggttccacatgacatttctccacacttggatgattttgtccgcatc
aaaactgggatgcagattgttatacaagctggattgcttaaagatggtttttgttctgtc
caagatgagagtgctggactggttgtctccattgtcgatccacaacctggtgagagcatt
ctagattgttgtgctgctccaggaggaaaaacacttttcttggcatcctgtttatatgga
aaaggtatggtaactgcagttgacataaataaggggcgtctgcgaatccttaaagagact
gcaaaaaagcatcaagttcagaatgttgttactgctgttcatgctgatctccgaacattt
gctgagaataaccatgtcatgtatgacaaagttcttctggatgcaccttgttccggattg
ggtgtgctctctaagagagcggatttgcgctggaataggcggttggaagacatggaacaa
cttaaagctttgcaagatgaacttcttgattcagcttcagtgttggtgaaacctggtgga
cttctaatatacagcacctgttccattgatctggaagagaatgagcagagagttgcttcg
tttcttctcaggcatccagaatttgttgtagatacagctgacggatatgtacctcatgag
tttgtcgctgaaaatggcttttatcactgtaatcctgtaaagcattcacttgatggagca
tttgcagctcgtcttattcgatcttattga
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