Coffea arabica (coffee): 113688186
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Entry
113688186 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113688186
03015 mRNA surveillance pathway
113688186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113688186
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113688186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_ACIN1
RRM_10
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
113688186
NCBI-ProteinID:
XP_027061702
UniProt:
A0A6P6S8E3
LinkDB
All DBs
Position
5e
Genome browser
AA seq
434 aa
AA seq
DB search
MAKPGRGRPATPSGSGSGSSSRSRSRSPSRSKSRSRSYSGSDSRSSSRSRSLSRSRSRSR
SLSKSFSSSSSPSRSGSSRSPNPPPQRKSPGEGARRGRSPPPQSKKVSPPPRKASPVPES
LTLHVDQLTRNVNESHLKEIFGNFGEVVHVRLVIDHAVNISKGSGYVEFKNRTDAEKAQL
YMDGAQIDGKVVHAKFTLPERKKVSPPKAVASTSRRDASKADSAGRDLDKDGLKRPREAS
PRRKPPSPPRRRSPAMRRGSPRRELDSPPRRRADSPGRRRPDSPYRRVASPPPRRRLASP
ARGRSPSSPPRRFRSPPRASPRRIRGSPMRRRSPPPPPPRRRSPRRGRTPPRRSPIGRRR
SPARRPVRSVSRSLSPRRGRAPPVRRARSSSYSSSPSPRKGPRRASRSRSPRRPLRGRSS
SNSSGTSGSPPRKP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaggccgaggccgaccggctacaccgtcgggctctggttcgggctcttca
tcacgttcccgctctcgctctccatctaggtcaaagtctcgctcgcgctcctactccggc
tccgactctcgctctagttcccgctctcgttctctatctcggtcgcgctcccgttcccgt
tctctctctaaatccttctcttcttcgtcttctccttctcgtagcggcagttctcgtagc
cctaatccacctccccagcggaaaagtccgggtgaaggagctaggcgtggtcgatctcca
cctccgcagtctaagaaagtttcaccacctccaaggaaagcatctccagtccctgagtca
ctaacacttcatgttgatcagctcaccaggaatgtcaatgaaagccatctgaaagaaata
tttggtaattttggtgaagttgtgcatgtgaggctggtaatagaccatgcggttaacatt
tcaaaaggttctggatatgtcgaatttaagaacagaactgatgctgagaaagctcagttg
tacatggatggagcccagattgatgggaaagttgttcatgccaaattcactttacctgag
aggaagaaggtttcccctcccaaggctgttgcttcgacatctagaagagatgcttctaaa
gctgatagtgctgggcgtgacttggacaaagacgggctgaagcggccgagagaagcatcc
cctcgtcggaaacccccctcgccaccgaggaggaggtctccagcaatgcgaagaggatct
cctagacgtgagcttgattctcctcctcgtcgacgtgcagactctcctggtcgtcgtaga
ccagattccccttatcgacgagttgcttcacctcctcctaggagacgccttgcatctcct
gccagaggtcgttcaccctcctcacctcccaggcgattccgttcacctccgagggcttct
ccccgaaggatacgtggtagtcctatgcgaagacgttctcctcctcctcctcctcccaga
agacgttccccccgtcgaggtcgaacacctcctagacgttcaccaatcggtcgcagacgt
tctcctgctcgtaggcctgttcgttcagtttcgagatcattgtctccaaggagaggccgt
gcaccccctgtcagacgtgcaagatcatcatcctactcatcatctcctagtcctcgcaag
gggcccaggagagcatcgaggagtcgcagcccaagaaggcctttaaggggtagaagctca
agtaatagcagtggaacaagtggttcaccacctcgtaagccctga
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