Coffea arabica (coffee): 113688244
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Entry
113688244 CDS
T11342
Name
(RefSeq) fimbrin-1-like
KO
K17275
plastin-1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113688244
04147 Exosome [BR:
carb04147
]
113688244
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
113688244
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of microglial cells
113688244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
CAMSAP_CH
CH_2
EF-hand_7
TEDC1
Motif
Other DBs
NCBI-GeneID:
113688244
NCBI-ProteinID:
XP_027061804
UniProt:
A0A6P6S7N1
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All DBs
Position
5e:complement(53340324..53346766)
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AA seq
730 aa
AA seq
DB search
MSTFVGVFVSDQWLQSQFTQVELRSLKSKFASIKNQNGKVEVGDLPPLLAKLKAFGEMYN
EEEIRKVLGESNPDMRSEIDFEGFLRAYLNLQSQANARKGSPKSSSSFLKATTTTLLHTV
SESEKSSYVAHINSYLRDDPFLKHFLPIDPASNALFDLARDGVLLCKLINVAVPGTIDER
AINMKRVLNPWERNENHTLGLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLL
ADLNLRKTPQLVELVEDNNDVEELMGLAPEKLLLKWMNFHLKKAGYKKTVSNFSSDLKDG
EAYAYLLNVLAPEHCSPATLDAKDPVQRANLVLDHAERMDCKRYLTPKDIVEGSTNLNLA
FVAQIFHQRNGLSTDNKKISFAEMMTDDEQMSREERCFRLWINSLGITSYVNNLFEDVRN
GWVLLEVLDKIFPGSVNWKQATKPPIKMPFRKVENCNQVIKIGKQLKLSLVNVAGNDFVQ
GNKKLILAFLWQLMRCNILQLLKNLRSRFQGKEISDADILKWANKKVKSTGRSSQMESFK
DKSLSSGLFFLELLSAVEPRVVNWNLVTKGESDEEKKLNATYIISVARKLGCSIFLLPED
ITEVNQKMILTLTASIMYWSLQQPVEDSDSSPSTTRTPDASPGSSTNGYPSPSIIDSPGV
SSGLTFNGSSSPVATASPGESPAQSVNGEDDSSLGGGEVSNLTIDDAASDSTVSSSQVEN
EDTHPLVAEE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttgttggagtttttgtttctgatcaatggcttcagagtcagttcacacag
gttgaacttcgcagcctcaaatccaaatttgcttcgataaagaatcagaatggtaaagtt
gaggtaggcgatttgccgcctttattggctaaattgaaggccttcggtgagatgtataac
gaagaggagattcggaaggtattaggagaatctaatcctgatatgaggagtgaaattgat
tttgaaggcttcctcagggcatatttgaacttgcaaagtcaagctaatgcaagaaaaggt
agtccgaaaagttcctcctctttcctcaaggcgaccacaaccactcttcttcatacagtt
agtgagtcagaaaagtcatcatatgttgctcacatcaacagctatctcagggatgatcca
ttcttgaagcactttcttccaatagatccagcttccaatgctttgtttgatcttgcaagg
gatggagtacttctatgcaagttaatcaatgttgcggtacctggtactatagatgagcgt
gctattaatatgaaaagggtgctcaacccatgggaaagaaatgagaaccacacacttggt
ctcaactctgcaaaagctatcggctgcacagttgtgaacattggcacccaggaccttgta
gaaggaagaccacatctagtacttggtttgatttctcaaattataaagatccaactgttg
gcggatcttaatctcaggaagacacctcagcttgtggagctggtggaggacaacaacgat
gttgaggagcttatgggattagctccagaaaagctattgctaaaatggatgaatttccat
ctgaagaaagcaggctacaagaaaactgtctcaaatttttcttctgatctgaaggatgga
gaggcatatgcttacctacttaatgtacttgcacctgagcactgtagtccagccacatta
gatgccaaggatcctgtccaaagagcaaatttggttcttgaccatgcagagcgaatggac
tgcaaaagatacttaaccccaaaggatattgtcgaaggctcaaccaacttgaatctcgca
tttgttgcacagattttccatcagaggaatggcttgtccacagacaataagaagatctca
tttgcagagatgatgactgatgatgaacaaatgtctagagaagagagatgcttccgactg
tggatcaacagtttgggaatcacatcttatgtcaataacctctttgaggatgttagaaac
ggttgggtattgttggaggtgctggacaagatttttccgggatcagttaattggaaacag
gcaacaaaacctcctataaaaatgccgttcagaaaggtggagaattgcaaccaagtcatc
aaaattgggaagcaattgaaactttccttggtaaatgtagctgggaatgattttgtgcag
ggaaataagaagcttatacttgcttttctgtggcaattgatgaggtgtaatattcttcaa
ctcttgaagaatttgagatcacgcttccaaggcaaggagatatctgatgctgatattcta
aagtgggcaaacaaaaaagtgaagagtacaggcagatcatctcaaatggagagttttaag
gacaagagcctctcatcgggactattcttcctggagcttcttagtgcagtggagccacga
gttgtcaactggaacctcgttacaaagggtgaaagtgatgaggagaagaagttgaatgcc
acttatatcatcagcgttgccagaaagcttgggtgctccatattcttgttacctgaggac
atcactgaggtaaatcaaaagatgatccttactctgactgccagcatcatgtattggagc
cttcagcaaccagttgaagattcggattcatctccatccactactagaactcctgatgct
tctcctggatcatcaactaatggctatccttctccttccatcattgattctcctggtgta
tcctctgggctcacattcaatggctcttcatctcccgttgcaacagcttcccctggtgaa
tcccctgcgcagtctgttaacggcgaagatgatagttcacttggtggtggtgaagtgtcc
aacttgaccattgatgatgcagcatccgacagtacagtctcctcttcacaagtagagaat
gaagatacacatccactggttgctgaagaatag
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