Coffea arabica (coffee): 113688319
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Entry
113688319 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113688319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113688319
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113688319
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113688319
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
113688319
NCBI-ProteinID:
XP_027061921
UniProt:
A0A6P6S7P8
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Position
1e:complement(5373517..5375387)
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AA seq
262 aa
AA seq
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MDASNSVLHNLLDCPVCMNTMFPPIRQCSNGHALCSNCKSRVNRCPICRDELGNIRCLGL
EKLGESLEWPCKYLNVGCRDLLPYSNVINHELTCKFRPYNCPAVGVACPITGDVSFLVNH
LKNDHRVNVFNSWTFNNLYTESDPEEVLNNSWKIAVYDCFGYQFCLCFEVFMWGSSQVYI
AYMRFMGEPEDAKRFGYRLEVCSSGKSLSWRSIPRSIREPSIRVRESLDGLIIRRDLALF
FSDGDKKQLKLAISGYICSITT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcaaattcagtgttgcataaccttctagattgtcctgtgtgcatgaacaca
atgttccctccaatccgccaatgttctaatggccatgctttatgctcgaattgcaagtct
agagttaatcgttgcccaatatgccgcgatgagttaggaaacataagatgtttgggtttg
gagaagttgggagaatcactagaatggccatgcaagtacctaaatgttggctgtcgagac
ttgctcccttacagcaatgtcatcaatcatgaactcacttgcaagtttagaccttacaat
tgccccgctgttggagttgcatgtcctataactggtgatgtttcattcttagtcaatcat
ctcaagaatgatcaccgtgttaatgtattcaatagttggaccttcaacaacctttatacc
gaatcagatccagaagaagttctcaacaattcatggaagattgctgtgtatgactgtttt
ggctaccaattctgcttgtgtttcgaggtatttatgtggggtagctctcaggtttatata
gcatacatgcgcttcatgggtgaaccagaggatgcaaaaaggtttggttatcgcttggaa
gtttgtagctcgggaaaatccctgtcgtggagaagcattccgaggagtatccgtgaaccc
agcataagagttcgagagagtttggatggactgattatccgtcgagacttggctctcttt
ttttctgatggggataagaagcagttgaaactagccatatctggctatatttgttctatt
acaacctaa
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