Coffea arabica (coffee): 113688367
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Entry
113688367 CDS
T11342
Name
(RefSeq) KH domain-containing protein At5g56140-like isoform X1
KO
K14945
protein quaking
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113688367
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113688367
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
HHO5_N
KH_1
Qua1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
113688367
NCBI-ProteinID:
XP_027061975
UniProt:
A0A6P6S753
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Position
5e
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AA seq
309 aa
AA seq
DB search
MSSGRYMAYSPSPSAPHSPHIGPAAASGLRSAASALAEQEKYLSELLAERHKLNPFMPVL
PHSYRLLNQEILRVTTLLGNASVLDQSGLEHASPLASGGIYSHGGANVNRWASPFQSEIS
GLMQPPSAQNWLGSQASSSGLIVKRTIRVDIPVEQYPNFNFVGRLLGPRGNSLKRVEANT
DCRVLIRGRGSIKDPTKEDMMRGKPGYEHLNEPLHILVEAELPVEVIDARLMQAREILED
LLKPVIGISNDEAFCPLQMQDESQDFYKKQQLRELAMINGTLREEGSQMSGSVSPFHNSL
GMKRAKTRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggaaggtacatggcttactcgccctctccctctgcccctcactctcctcac
atcggccccgccgccgccagtggtctacgctccgccgcctccgcccttgctgagcaggaa
aagtatttatccgagttacttgcggaaaggcataagcttaatccgtttatgccagtgctg
ccccatagttatcgactgttgaatcaggaaatattgcgtgtaaccacactcttggggaat
gcatcagttttagatcaaagtgggcttgaacatgctagccccctggcttcaggaggaata
tattcacatggaggagctaatgtgaacagatgggcatcaccatttcaatccgaaatatca
ggtctgatgcagccaccatctgcacaaaattggttaggttctcaagcaagctcatcaggt
cttatagtgaaacgcacaatcagggttgacattccagtggaacagtatcctaattttaat
tttgttggacgcctccttggtcctagagggaactctctcaagagagttgaagccaatact
gactgtcgtgttctcattcgaggccgtggcagcattaaggacccaacaaaggaagacatg
atgagaggcaaaccaggatatgaacatctaaatgaaccacttcacatactagttgaagca
gaattgccagttgaggtaatcgacgctcgtctgatgcaagcacgtgagatacttgaggat
ttgctgaagcctgtgattgggatatccaatgatgaagcattctgtcctcttcaaatgcag
gatgaatctcaggacttctataaaaagcagcagttacgagaactcgccatgattaatggc
actcttcgtgaagaaggttcccaaatgtctggatctgtgtcccctttccataacagcctt
gggatgaagagggccaaaacgagggggtaa
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