KEGG   Coffea arabica (coffee): 113688564
Entry
113688564         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
carb  Coffea arabica (coffee)
Pathway
carb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113688564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113688564
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     113688564
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 113688564
NCBI-ProteinID: XP_027062224
UniProt: A0A6P6S9I5
LinkDB
Position
5e:53085079..53090783
AA seq 322 aa
MANLPQSLSMNAAAAFGGPGSSSASPSAAGTQGNKDRKMMSAEQLVLELSNPDLRENALL
ELSKKREIFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCV
ASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLS
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL
AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLL
HNVQGPRVALQAGTGFDHMLVN
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgaacttacctcagtccttgtcgatgaacgccgccgccgcttttggtggtccaggc
tcgtcgtcggctagcccttccgccgctggaactcaaggcaataaggatcgaaaaatgatg
tctgccgagcagcttgtacttgaacttagcaaccctgatctccgagaaaatgcccttctc
gaactctccaagaagagggaaatctttcaagatttggctccattactttggaattctttt
gggactattgctgcactcctgcaggaaatagtttctatctaccctgttttatctccacca
aacctgactcctgcacagtcaaatagggtttgcaatgcacttgctcttctgcagtgcgtg
gcttctcatcctgacactagaatgttgttccttaatgcccatataccactgtatttgtat
ccatttctcaatacaacaagcaaatcaaggccttttgaatacctgaggcttaccagtctg
ggtgtcattggtgcactggtgaaggttgatgacactgaggttattagtttcctcctctca
acagagataattcccctgtgccttcgcacaatggagatgggtagtgaattatcaaaaaca
gttgccacatttattgtacaaaagattctgctggacgatgtgggcctggattacatatgc
accacagcagagcggtttttcgctgtaggtcgagtcctgggaaatatggtggctgcactt
gctgagcagccatcatcgcgactgctaaagcacattattaggtgctaccttaggttgtca
gataacccaagggcttgtgatgcacttcggagctgccttcctgacatgcttagagacgcc
accttcagcagttgccttcgtgaagatccaacaacgagacgatggctccaacagttgctt
cacaatgtccaagggcctcgggttgcactgcaagctgggacagggttcgaccatatgcta
gtgaactga

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