Coffea arabica (coffee): 113688755
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Entry
113688755 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113688755
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
113688755
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
113688755
NCBI-ProteinID:
XP_027062352
UniProt:
A0A6P6SA46
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Position
5c:complement(42037600..42041603)
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AA seq
903 aa
AA seq
DB search
MVGSLQSPNPKKEEKECSNDLSFSVLGLEDLSFSCIDSFLDFDYIEDWIEENPEPYSKSM
ANDLGENSVGFSSEKVASEMFDKSLEIGSAGLVGEEGGRKLGSLGQEKVEFVGGEKGSEM
GCQRFCDKIKVEEGIDGVDGIKSGGLGCSIEEEMGKVSLQGGWSDPDSVFGGLTGVKQVG
EGCDNGNSEDDCGCDVVKSVEANISGTDGKEIGVVENSGAKTSKTSETMNVDNTEEKIGK
NVSEGDVSESNSDSECESDSEIESSSSSSSSSSSSSGSSDDDDDDEVDGKEKRGSSKERK
GQDLEMEEGEIVASDPEEMVAWSGDDEYGEDEGGSGVSTLGPPKSKNELTLLPPVPPVNV
ALLPHHKIQPVGVVLSVLGAQVIVEGVEKHNPLNEGSILWITESRSALGLVDEIFGPVRN
PYYIVRYNSESEVPPGIQPGISISFVPEFANHVLNDKSLYSKGYDASGANDEELLEEEEF
SDDEKEAEHRKMQRNKKRGTNDNKIGNVKKDEKRFGNWSRNSKYDSTVNRHLPMEGAKRQ
VDHSSHHVPPAVVSQHQGNGLHSLSLGQGSTCQPGLAPPFVQLASTTGFSALSGGANGIA
FQQPQTVGFPGLPTNGMPTVRNPYYVGGCNSENEAEYGKTLKNENMRRNDDKFDNQKKDR
LQLGNWSGNSRKDPAANPQGSLERGKLPFDHTKHHVPPLAPPPDQGNGSFSGLGQGLAFQ
PGLGSPFVQLSLGSGFSATSGGANAIPFQQPLSFGFPQLPVNVNPWVQQINQLHQMPSQN
ILSFQQQINASQNLPSNLVISGMQSGFGAEPSCSSQNAFHRLPFGVTTPGQQASLPINVG
EQAVPVNMSETMHNYEPQQLASFTHKRDTYRSISHGKHYRGGRKPNRRGGGQFGGGRGRQ
QHG
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggtaggttctctgcaaagtcccaaccctaaaaaagaagaaaaagaatgctcaaacgat
ctttctttctcagtcttaggccttgaagatctttctttctcatgtatagactcttttctt
gattttgattacatcgaggattggattgaggagaacccagagccatatagtaagagtatg
gctaatgatttgggagaaaactccgttggttttagctcagaaaaagttgcatctgagatg
tttgataaaagtcttgaaataggttcagctgggttagttggtgaagagggtggaagaaag
ttgggatctttgggtcaagaaaaggttgaatttgtaggaggtgagaagggtagtgaaatg
ggttgtcaaaggttttgtgataaaattaaggttgaagaggggatagatggggttgacggt
atcaagtcgggaggcctgggatgttctattgaggaagagatggggaaagttagtttgcag
ggaggttggagcgatccagattctgtttttggtggtttgactggtgtaaagcaagttgga
gagggttgtgacaatggaaatagtgaggatgattgtggttgtgatgtggtgaaaagtgtt
gaggcaaacattagtggtactgatggtaaggagatcggtgttgttgaaaattctggcgcg
aagaccagtaaaacaagtgagacgatgaatgtagataatactgaagaaaagattggtaag
aatgtgagtgagggagatgtgagtgaaagtaatagtgactccgagtgtgaaagtgacagt
gaaattgaaagttcatcttcatcttcctcttcctcttcctcatcatccggcagtagtgat
gatgatgatgacgatgaagtcgatggcaaggagaagcggggaagtagcaaagaaagaaaa
ggacaagatttagagatggaagagggtgagatagtcgcttctgacccagaagagatggtg
gcctggagcggtgacgatgaatatggcgaggatgagggtggcagtggcgtttccacgtta
gggcctcctaagtccaaaaatgaactcacgcttcttcctccagttcctccagtgaatgtg
gccctactaccacaccataagatccagccagttggagttgttttatcggtgttgggggct
caagtcattgtagaaggggttgaaaaacataatcctctcaatgagggctctatattgtgg
attacagaaagcaggtccgcactggggttagtggatgaaatttttggtccagtgaggaat
ccttactacattgttaggtacaattcagaaagtgaagtacctcctggaatccaaccaggc
atttcaatatcttttgttccagaatttgcaaatcatgtcctcaacgataagagtctttac
tcaaaaggatatgatgcatcaggagcaaatgatgaagaattattagaagaagaagaattt
tcagatgatgagaaggaggctgagcacagaaaaatgcagaggaacaagaaaaggggcacc
aatgataataaaattggaaacgtgaaaaaggatgaaaagagatttggaaattggtctagg
aactcgaaatatgactctacagtcaacagacatttacctatggagggagctaagcgacaa
gttgaccacagtagccatcatgttccccctgctgttgtatcgcagcatcaaggcaatggg
ttacactccttgagcctaggacaaggttcaacttgtcaacctgggctggctcctccattt
gtacaactggcatcaaccactggttttagtgcgttgtctggaggggctaatggcattgcg
ttccagcagcctcaaactgttggctttcctggattaccaacaaatggcatgccaacagtg
agaaatccttattatgtgggagggtgcaactcagaaaatgaggcagagtatggtaaaacg
ctgaaaaatgagaatatgcgtagaaatgatgacaaattcgataaccagaaaaaggatcga
ttgcaattgggaaattggtcggggaattcgaggaaagatcctgcagctaacccacaggga
tctctggagagaggtaaactaccatttgatcacaccaagcatcatgtgccccctttggct
ccaccaccagatcaaggcaatgggtcattctctggtctgggacaaggtttggcttttcag
cctggtttgggttctccatttgtccaactttccttgggctctggttttagcgcaacttct
ggtggggcaaatgcaatcccatttcagcagcctctaagttttggctttcctcagttaccc
gtaaatgttaacccatgggtgcaacaaattaatcagcttcatcaaatgccttcgcagaac
atattgtcgttccaacagcaaattaatgctagtcaaaatttgccttctaacctggttata
tcaggcatgcagtcaggttttggtgcagaaccttcatgctcgagtcaaaatgcatttcac
cgtttaccatttggagtgactacaccaggtcaacaggcctccctccccataaatgtagga
gaacaggcagttccagtaaacatgtctgagacaatgcacaattatgaaccacagcaactt
gcatcttttactcataaacgggacacataccgaagcattagtcatggtaagcattatcgt
ggaggtagaaaaccaaatcgtaggggtggtggtcaatttggaggtggaaggggcaggcaa
caacatggctaa
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