Coffea arabica (coffee): 113688785
Help
Entry
113688785 CDS
T11342
Name
(RefSeq) zinc finger CCCH domain-containing protein 2-like
KO
K23047
E3 ubiquitin-protein ligase UNKL [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113688785
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113688785
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113688785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_AtC3H23
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_RBM22
Nab2-zf4
DUF5644
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
113688785
NCBI-ProteinID:
XP_027062383
UniProt:
A0A6P6S8C3
LinkDB
All DBs
Position
5c:42930709..42932417
Genome browser
AA seq
397 aa
AA seq
DB search
MSLSTFSSSSDMTSVFADQQQQHKFHQLSYLNKKSPREIEIPPRKLLSRRAAASGSMHLD
SGDMFMDSPKAEEALLQKFLPYNNIDDDDADPYSSDHFRMYEFKVRKCTRSRSHDWTDCP
FAHPGEKARRRDPRRYHYSGTVCSEFRRGNCSRGDNCEYAHGVFECWLHPSRYRTEACKD
GKNCKRKVCFFAHSPRQLRVLPASCHETASSPVNSPVEKQQQHHRNVNHCCMYCHSVAAS
PTSTLMGMSHLSPPLSPPLSPPISPAKAAQFSPVSRYKDHFASVEPCGMAQFGSGGMGGM
SYKDALAELMSSIEAMRVNESSSRAAASNNGISLPWIDVNFNGDDQQQFILSPSTPSPGT
SKFLSRNFPSRNFIEENKFTENGLAGPDLEWVNDLLT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatcaacattctcatcatcatcagatatgactagcgtttttgctgatcagcag
cagcaacacaagtttcaccagctcagctacctcaacaaaaagagccctagggagattgag
atcccaccaagaaagcttctcagccgccgtgctgccgcctccgggtccatgcatcttgat
agcggtgacatgtttatggattctcccaaagctgaagaagcccttcttcagaaattcttg
ccttacaacaacattgatgatgatgatgctgatccttactcatctgatcatttcagaatg
tacgaattcaaggtcaggaagtgcactcgcagccgtagtcatgactggacagactgccct
tttgctcatccgggagaaaaggcccggaggagggatccccgaaggtatcactattctgga
actgtttgctctgaatttcgccgtggaaattgcagccgcggcgataactgcgagtatgct
catggtgtttttgagtgttggttacacccctctcgctatcggaccgaggcatgcaaagat
gggaagaattgcaagcgaaaggtctgttttttcgctcattcgcctcgccagctacgtgtt
ttgcctgccagttgtcacgaaaccgcttcatctccagtgaattctcctgttgaaaagcag
cagcagcaccacaggaatgtgaaccattgctgtatgtattgccattctgttgctgcttca
cctacctctactctgatggggatgtcccatttgtctccgccgctgtctccaccgctttcg
ccgccgatctcaccggcgaaagcggcccagttttctcctgtttcgaggtacaaagatcat
tttgcaagcgttgagccatgcgggatggctcagtttggttctggtgggatgggtgggatg
agttacaaagatgcattagcagagttgatgagctctattgaggccatgcgcgtgaatgag
tcttcatctcgtgcagctgcaagtaataatgggattagtttaccatggattgatgtgaat
ttcaatggtgatgatcagcagcagttcattctgtctccttcaaccccaagtccagggaca
agcaaattcctgagtaggaattttccaagcaggaattttattgaagaaaacaagttcact
gaaaatggcctggctggacctgatctggagtgggtcaatgatctcttgacctaa
DBGET
integrated database retrieval system
