Coffea arabica (coffee): 113688807 Help Entry 113688807         CDS       T11342                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism carb  Coffea arabica (coffee) Pathway carb03018   RNA degradation Brite KEGG Orthology (KO) [BR:carb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     113688807  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:carb03019]     113688807 Messenger RNA biogenesis [BR:carb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      113688807   mRNA degradation factors    5'-3' decay     Decapping complex      113688807 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  113688807 NCBI-ProteinID:  XP_071907676 UniProt:  A0ABM4UK67 LinkDB All DBs Position 5c:complement(48998076..49004727) Genome browser AA seq 822 aa AA seqDB search MDRFEGGDGIKESSNSQDLGQFGENPTGDAVFDASQYAFFGNDAVEEVELGGLEDDEDEI PQVGLADEEYQLDREEGEVLGSFTEIDDLASTFSKLNKVVSGPRDAGAIGDMGSRESSSA AEWVREEDFPSWADQNAFDTESTQDSKSWSSQPYPASAYYLDSKSLYRTSSYPEQPQQYP QQQLNIHQHYSSEPILIPKSSFTSYPPPGGRSLQGSPNDQARQANIPYHPGGPQIPRSST NLSPFPNPQLQMTALPHGSPVGGNMPQFSPSGLPISSRLQNQWLTQTNMYPGDHSNLPNS MLQQHLPHQNGLLPPQLMSQQQLQQHRLQNPFQPAFGHLPGLPSQVLNHHLSSSPQVTNN FDMLGLADLRDPRIKSMVRGRQGMRYSPGFDINSQKSDNGWPVFKSKYMTADEIENILRM QLAATHSNDPYVDDYYHQACLAKKTASAKLKHHFCPNNLRDGPARVRANNEPHAFLQVDA LGRVSFSSIRRPRPLLEVEPPNVSGTGTTEPKVCEKPLDQEPMLAARVTIEDGICLLLDV DDIDRFLQFNQLQDGGAQLTQRRQVLLEGLAASLQLVDPLGKNGNTVDRAPKDDLVFLRL VSLPKGRKLLSRYLQLLPPDDELVRVVCMAIFRHLRFLFGGLPADPGAAETTNDLAKMVA FSVHGMELKALAACLASVVCSAEHPPLRPIGSPAGDGASLILKSVLERATDLLRDPRASG NCSMPNRAFWQASFDAFFGLLTKYCFNKYDTIMQSFLSQTLPDMSNVSSDAAKAISKEMP VELLRASLPHTSEQQRKLLLDFAQQSMPVQGLGNQGGDSGGP NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atggatagatttgaaggtggggatggtattaaagagtcctccaattctcaggatcttgga caatttggtgaaaatccaacaggggatgcagtatttgatgcatcacaatatgcattcttt ggcaatgatgcagtagaagaagtagaactcggtggtttagaagacgatgaagatgagatt cctcaagttggtcttgctgatgaagagtatcaactagatagagaagagggtgaagtactt ggatcttttactgaaattgatgatcttgctagcacattttcaaagttgaacaaagttgtc agtggcccacgagatgctggagctattggagatatgggatcaagagaaagttcatctgca gctgagtgggtgcgagaggaagattttcctagttgggctgatcagaatgcatttgataca gaaagtacacaggacagtaagagttggtcatcacagccatatcctgcgtctgcttattat ctggattctaagagtctctacagaacatcttcgtatcctgagcaaccacagcagtaccca cagcagcagctaaatatacaccagcactactctagtgaaccaattcttataccaaaatct tctttcacttcatatcctcctcctggaggcagatctctccaaggctctccaaatgaccaa gcacgacaggcaaatattccatatcatcctggtggacctcaaattccacgctcgtcaacc aatctttctccctttcctaaccctcagcttcagatgactgctttacctcatggttcacca gtgggtggaaacatgcctcagtttagtccttcaggtctgccgatcagtagccgcctgcaa aaccagtggttgactcaaacaaatatgtaccctggggaccattctaaccttccaaatagt atgttacaacaacatttacctcatcaaaatggactattgcccccccagttaatgtcacaa cagcaacttcaacaacacagattacagaaccctttccagccagcatttggccatttacct ggattgccatcccaagtactcaatcaccatctttcatcttcccctcaggtgacaaataat tttgatatgcttgggttggctgatttgagagatcctaggattaaatcaatggtaagaggt aggcaaggcatgcgctattcaccaggatttgacataaatagccagaagagtgacaatggg tggccagtgtttaaatccaaatacatgacagctgatgaaattgagaatattctgaggatg cagcttgctgctacacacagcaatgacccttacgtagatgattattaccatcaagcttgt ctagcaaaaaaaactgctagtgcaaagttaaagcaccatttttgcccgaataacctgagg gatggtcctgctcgggttcgcgctaataatgagccacatgcctttctccaggttgatgca cttgggagggtttccttttcttcaattcgcagaccccgtccattgctggaagttgaaccc ccaaatgtatctggtactggtaccactgaaccaaaggtgtgcgagaaacccctggaccag gaacctatgcttgcagctagggtgactattgaggatggcatttgtcttctacttgatgtt gatgatattgaccgttttctgcaatttaaccaactccaagatggtggagcacagttgact cagagacggcaagtactgctggaaggtctggcagcatcacttcagctggtggacccattg ggcaagaatggcaacacagtggatcgggctcctaaggatgatcttgtgttcctgaggttg gtctctcttcccaagggtcggaagctgttatcaaggtatcttcaacttcttcctccagat gatgaacttgttagagttgtctgcatggcaattttccgtcatttaaggtttttgtttggg ggcctccctgctgatcctggagctgctgaaactactaatgaccttgcaaaaatggttgca ttttctgttcatggaatggagcttaaagcacttgctgcatgtcttgcatctgtggtttgt tcagctgagcatcctcctcttcgtccaattggaagccctgcaggagatggggcttctctg attctgaaatctgttcttgagagggcaactgatcttcttcgagatcctcgtgcttctggc aactgcagcatgcccaatagagcattttggcaggcctcttttgatgcattttttggtctt ctcacaaagtattgcttcaataagtatgacaccattatgcaatcatttcttagtcagacc ctgccagacatgtctaatgttagttctgacgcagccaaagccatcagtaaggaaatgccg gttgaactcttgcgagctagtctccctcataccagtgagcaacaaagaaagctgctattg gattttgcacagcagtcaatgcctgttcaagggttaggtaatcagggtggtgatagtggt ggcccttga

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