Coffea arabica (coffee): 113688830
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Entry
113688830 CDS
T11342
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113688830
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113688830
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NCBI-GeneID:
113688830
NCBI-ProteinID:
XP_027062431
UniProt:
A0A6P6S978
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Position
5c:complement(7111818..7130682)
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AA seq
606 aa
AA seq
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MIKKAGHVLKTLCKTSSLPLHRQSQGQMDLSERYCYEPSLKWNPKVEEYFIKAYGPEHFS
RISEALTRPSCYSCIRVNTLKSTSDAVIKKLSAILQERGLHNGMIRISNDRKHMEDFCSK
PIEIGESADTRQIYAQNNLVSKCMIPGLDHVIFVRGSGPHAIDYGLSGGKSPKEVIVSRK
CAEAVLRGAQVYVPGVLACSAHVEKGDVVAVSVAVEQPGADGGWGANITRGTILQGSPAD
PYYFERNGLYIGQGITMLSRAGMFRVPVGVAVDMNCRVFDLPSFHDLLEGEIFLQNLPSI
IAARALDPQRGERILDMCAAPGGKTTAIAILMQDEGEVIAVDRSHNKVLDIKKLAAEMDL
TCITPYKLDALKAVRRSESDDFAASHFPQDVVGIEERIEKTSMAASDDLDAELVPQSCDV
NSKNGTYSSKAVERKIMRKMRNGPGRNHCSGGRVEKSKGFLPNSFDRVLLDAPCSALGLR
PRLFAGEETVESLRNHAKYQKRMFDQAVQLVRPGGVIVYSTCTINPGENEGLVRYALDTY
KFLSLASQHPRVGGPGLLGGCQLSDGYTEEWLRPGEEDLVQRFDPSSPLDTIGFFIAKFN
VSSKAA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaagccgggcacgtgctcaaaaccctttgcaaaacctcctcactccccctc
caccgccaaagccaaggccaaatggatttgtcagagcgttattgctacgagccgagcttg
aaatggaaccctaaggtggaagaatacttcatcaaggcttacgggccggagcatttctcc
cgaatttccgaagccctgacgcgtccatcatgttactcttgtattcgtgtaaacacactc
aagtcaacaagtgatgctgtcatcaagaaactttctgccattctacaggaaagagggttg
cataatggtatgattagaatatcaaatgatcgtaaacatatggaggatttctgttcaaaa
cccatagagattggtgaaagtgctgacacacgacaaatatatgctcagaacaatcttgtt
tcaaagtgtatgatacctgggctagaccacgtaatttttgtcagagggtcaggaccgcac
gctattgactatggattaagtggagggaaatctccgaaggaggttatagttagtaggaaa
tgtgcagaggctgttcttcgtggggctcaggtgtatgtgcctggtgttctagcctgcagc
gcccatgttgagaaaggcgatgtagttgcagtttctgttgctgtggagcagcctggtgct
gatggtggatggggtgctaatattacacgcgggaccattttgcagggatcaccagcagat
ccttattactttgaaagaaatggtctctatatcggccaaggaattactatgttgtcaaga
gctggtatgtttcgtgtaccagtaggagttgcagtcgatatgaattgtagagtatttgat
ctcccatcttttcatgatttgcttgagggagagatttttcttcagaacctgccaagcatc
attgcagcacgtgccttagatccacaacggggtgaaagaatattagacatgtgtgcagct
cctggaggaaaaaccactgcaatagcgatcctaatgcaggatgaaggagaggtcattgca
gttgacagatctcacaataaggtacttgatattaaaaagttggcagctgagatggacctg
acttgcatcaccccatacaagcttgatgcgctcaaagctgtccgcagaagtgaatctgat
gattttgctgcatcacactttcctcaagatgttgttggcatcgaggaaaggatagagaaa
acatcaatggctgcttctgatgatttggatgctgagttggttccccaaagttgcgatgta
aattccaaaaatggaacttattctagcaaagctgtggagagaaagattatgcggaaaatg
agaaatgggcctggaagaaatcactgttcgggtggtagagttgaaaagtccaaaggtttt
cttccaaattcttttgaccgggttcttttagatgctccttgttctgctcttggtcttcga
cctcgactgtttgctggagaggaaactgtagaatcattgaggaatcatgccaaataccag
aaaagaatgtttgatcaagctgttcaactagttcgtccgggtggggttattgtgtattcc
acatgtactataaatcctggagagaatgaaggattggttcgatatgcattggatacatac
aagtttctctcactggcttcacagcatccaagagttgggggacctggccttcttggtggc
tgtcagttatctgatggatatactgaggaatggttgagacctggagaggaagatcttgtt
cagaggttcgatccatcttctccactggatacaataggctttttcatagcaaagtttaat
gttagttccaaagctgcttaa
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