Coffea arabica (coffee): 113688836
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Entry
113688836 CDS
T11342
Name
(RefSeq) heat stress transcription factor A-4c
KO
K09419
heat shock transcription factor, other eukaryote
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113688836
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
113688836
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Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7491
Dynamitin
APG6_N
DUF3450
Seryl_tRNA_N
Rab11-FIP3
Nup88
PI3K_P85_iSH2
TMF_TATA_bd
SPC25_N
SHE3
Tropomyosin
HAUS5
YGR130C_N
XhlA
ADIP
CCDC163
SSNA1
TolA_bind_tri
USHBP1_PDZ-bd
ENTR1
ANG-1
CLZ
CC_Bre1
COG6_N
Motif
Other DBs
NCBI-GeneID:
113688836
NCBI-ProteinID:
XP_027062444
UniProt:
A0A6P6S9K9
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Position
5c:complement(44180693..44182664)
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AA seq
443 aa
AA seq
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MMDGSNGGSTASAPFLTKTYEMVEDPMTNSIVSWSHSGLSFIVWNPPEFARDLLPKYFKH
NNFSSFIRQLNTYGFRKSDPDQWEFLNEDFIRGQRHLLRNIYRRKPIHSHSVQGNSAVPL
GNAERQSFQEEIERLKGEKNLLQSELERHKQESREFETEVNSLAERLRNIDNRQRQLMAC
LAQLLQKPGFASGLMQQSENHNKRRRLLISNYLYDEANIGQSPVVSFQPENPNLCLPVLN
AELIEKLDASVNFWETFLYGMCSSSAEEMYGFACLPHPPPLTITGPLASSGDSDVNVQPC
SSNSLRSSPSGEFHSSPELVVSSNHVDSPATSSPCLDMDSRSKSSGIDVNTSPATIMEIE
TSKDRVGIVSASAPAGTNDVFWQQFLTETPGSSDTQEVQSERREIAARSSDSRLADHHRT
WWNKNNVENLTEQMGHLTPAEKT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggatctaatggtggatcaactgcatcagcaccttttttaactaagacgtat
gagatggttgaagaccccatgacaaattcaattgtttcttggagtcactctggtctgagc
ttcattgtgtggaatccaccagagtttgctcgagatttgctgccgaagtatttcaagcac
aacaacttttccagttttatcagacaactcaatacatatggttttaggaagagtgatcct
gatcagtgggagtttttaaatgaggattttataagagggcagaggcatcttctaaggaac
atctatcgtcgcaagccaatacacagccattctgtgcaagggaattctgcagtgccccta
ggtaacgcagaacgacagtcatttcaggaggagattgagaggctgaaaggggagaagaat
ttgctccagtcagagctagagaggcataaacaggagagtagagaatttgaaactgaagtt
aattcattggcagaacgcttgagaaatatagataataggcagaggcaattgatggcatgt
ctggctcaactccttcaaaaacctggatttgcttctggtcttatgcaacagtcagaaaat
cataataaaaggagacgattgttgatatcaaattacttatatgatgaagctaatattggt
cagagcccagttgtaagtttccaaccagagaacccaaatttatgtcttccagtgctaaac
gcagagctaattgagaagctggatgcatctgtaaatttttgggagacattcctatatgga
atgtgtagttcctcggctgaagaaatgtatggcttcgcttgtctcccgcaccctcctcct
cttactataactggaccacttgcatcatctggagactctgatgtgaatgtccagccatgc
tcatctaattctcttcgatcatcaccatctggcgaatttcattcatctcctgagttggtt
gtgtcttctaatcatgttgatagtccggcaacctcatctccttgtcttgacatggattca
agatctaaatcatcgggaattgacgtgaatacaagccctgctaccatcatggaaattgaa
acatcgaaggaccgagtgggcattgtgtctgcatctgcaccagctgggactaatgatgta
ttttggcaacaatttttaactgagactcccggttcctctgacacacaggaggttcagtct
gagagaagagagattgctgccagatcaagtgatagtaggttggcagatcatcacagaact
tggtggaacaagaataatgtagaaaacttaacagaacagatgggccacctcactccagct
gaaaaaacatga
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