Coffea arabica (coffee): 113688997
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Entry
113688997 CDS
T11342
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113688997
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113688997
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
113688997
NCBI-ProteinID:
XP_027062624
UniProt:
A0A6P6SA43
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Position
5c:complement(43115454..43118562)
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AA seq
470 aa
AA seq
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MTEEVISSGFIQTPIGEANPPPLKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGK
GFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPSRALGDLTGIKKHF
CRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDAL
AEETARVTAASNVVAANSINYHFVGASLGPGMGQHFASMFKPISTNNETPANPIRQGLSL
WMGGHGLSQTQESIGNNNLQEIHHQLNPAVSTSGLVFTTDPFVSVPCSNSPPINYPLNWD
FGNKPSSNSSEELTNNISSLPLSNVAKDGGSQVISVPSLFSTQHQSHQTHSTANMSATAL
LQKAAQMGATTTDPSFLGSFGLKCNDSQIQDGNRYCSPYGGTATSVATALQSSVTDHLST
LNELQMYPSKRRHIQVDQDSTPTTGGGQTRDFLGVGIQSICHPSSINGWI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaagtaatctcaagtggtttcatccaaactccaatcggcgaagcgaatcct
cctcctctaaagaagaagagaaaccttccaggaacaccagatcctgaagctgaagttatt
gccttgtctccaaagactctgatggccaccaacagatttttatgtgagatatgtggaaaa
ggttttcagagggatcaaaacctgcaacttcatcgaagagggcataatttgccatggaaa
cttaagcaaagaactagtaaggaagttcgaaagcgagtttacgtatgccctgaaaagtcc
tgcgtccaccaccacccttctagggcacttggggacttaaccggtataaagaagcacttt
tgtagaaagcatggggagaagaagtggaagtgtgagaaatgctctaaacggtatgctgtg
cagtcagattggaaagcccactcaaagacttgtggcactagggaatacaaatgtgactgc
gggactattttttcaaggcgagatagctttatcacccatagggccttctgtgatgcctta
gcggaagaaacagcaagggtgactgcagcatccaacgttgtagcagccaatagcatcaat
tatcattttgtgggagcatcactagggcctggcatggggcaacattttgcttccatgttc
aaaccgatctcaaccaacaacgagacaccggcgaatccaataagacaaggtctttcactg
tggatggggggccatggattatcccaaactcaagaatcaatcggcaataacaatcttcaa
gaaatccatcatcagcttaatccagctgtgagtacatcagggctagttttcaccactgat
ccatttgttagtgttccatgctctaattctccaccaataaattatccactcaactgggat
tttggaaataaaccctcctccaacagttcagaagaattaacaaataatatttcatctctt
cctttaagcaatgttgctaaagatggtggaagtcaggtcattagtgtaccatctttgttc
agtacccaacatcaatctcatcaaacacattctacagcaaacatgtctgccacagcttta
ctgcagaaagctgcccaaatgggagctaccacaactgacccttcattccttggaagcttt
ggattgaagtgcaatgatagccaaattcaagatgggaacagatattgtagtccgtatggt
ggtactgcaacttcagtagctacagctctgcagagttcagtaactgatcacctctcaact
ttaaatgagttgcaaatgtacccctcaaagcgccgccacatacaggttgatcaagattca
acaccaactacaggaggaggtcaaactagggattttcttggagttgggatacagtccatt
tgccatccatcatccatcaatggatggatatga
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