KEGG   Coffea arabica (coffee): 113689026
Entry
113689026         CDS       T11342                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
carb  Coffea arabica (coffee)
Pathway
carb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113689026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:carb04121]
    113689026
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:carb04147]
    113689026
Ubiquitin system [BR:carb04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   113689026
Exosome [BR:carb04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   113689026
  Exosomal proteins of other body fluids (saliva and urine)
   113689026
  Exosomal proteins of colorectal cancer cells
   113689026
  Exosomal proteins of bladder cancer cells
   113689026
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N TBK1_ULD DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 113689026
NCBI-ProteinID: XP_027062660
UniProt: A0ACM8RCZ6
LinkDB
Position
5e
AA seq 457 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaaaactcttacgggcaagaccatcactctcgaagtcgagagttct
gacaccatcgacaatgtcaaggccaagatccaggacaaggaaggaattcccccagaccag
caaaggttgatctttgctggaaagcaactagaggatggccgcaccctcgctgactacaat
atccaaaaggagtccaccctccacctggtcctccgtctgaggggtggaatgcagatcttc
gtcaagaccctcaccggaaagacgatcacccttgaggttgaaagttcggacaccatcgac
aatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcaaaggctcatc
ttcgccggaaagcaactcgaggacggtcgtacccttgccgactacaacatccaaaaggaa
tccaccctccacttggttctccgtttgaggggtgggatgcagatcttcgtgaagaccctt
actggaaagactattaccctcgaggttgaaagttccgacactattgacaacgtcaaagcc
aagatccaggacaaggagggtattccccccgaccagcaaaggctcatctttgctggaaag
caacttgaggatggccgaacccttgccgactacaacattcagaaggaatcaaccctccac
ctggtgcttcgtcttaggggaggcatgcaaattttcgtcaagaccctcaccgggaagact
atcaccctcgaagtggaaagctctgacaccattgataatgtcaaggctaagattcaagac
aaggagggtattcccccagaccagcagaggttgattttcgccggcaagcagcttgaggac
ggaaggactcttgctgattacaacatacagaaagagtccacccttcacttggtgctgagg
ttgaggggcggcatgcagattttcgtcaagacattgactgggaagacaatcacccttgag
gtggagagctctgataccatagacaatgtcaaggcaaaaattcaggacaaggaaggaatc
ccaccagaccagcaaaggttgatctttgctggtaagcagctcgaggatggacgcactctg
gcggattataacattcagaaggagtcaacccttcacttggtgcttaggttgaggggagga
atgcagatctttgtgaagactttgaccggaaagaccatcaccctagaggtggagagttcg
gacacaattgacaatgtgaaggctaagattcaggataaggaggggatcccaccagaccag
cagaggttgatctttgctggtaagcaattggaagatggcaggaccttggctgactataac
atccagaaggagtccaccctccaccttgtcctccgtttgcgcggtggcttctaa

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